RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 DEFB106AQ8N104 65 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 UBE2J2Q8N2K1 259 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 MAPK15Q8TD08 544 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 CALML6Q8TD86 181 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 P2RY11Q96G91 374 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 CPNE1Q99829 537 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 SEMA4BQ9NPR2 832 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-201ENST00000317716 TMPRSS4Q9NRS4 437 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 DNAJC28Q9NX36 388 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 HES2Q9Y543 173 aa7.6□□□□□ -1.19
CDHR3-201ENST00000317716 KANSL1LA0AUZ9 987 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ANKRD33BA6NCL7 494 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 VWA5AO00534 786 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 CYP7B1O75881 506 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 LINC00032P0C843 101 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ARSAP15289 507 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 CDH2P19022 906 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 GJA5P36382 358 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 EFNA5P52803 228 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 CCNA1P78396 465 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 MPP1Q00013 466 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SLC18A2Q05940 514 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 TGFBIQ15582 683 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 UGP2Q16851 508 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 MGAT5BQ3V5L5 792 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ATP6AP1LQ52LC2 224 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF280DQ6N043 979 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 NT5DC4Q86YG4 428 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 WDR49Q8IV35 697 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 BRSK2Q8IWQ3 736 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ZC3H3Q8IXZ2 948 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PGAM4Q8N0Y7 254 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SFRP1Q8N474 314 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 EFHBQ8N7U6 833 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PCDH19Q8TAB3 1148 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 COPS5Q92905 334 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ULK4Q96C45 1275 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 DEPDC7Q96QD5 511 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 CHID1Q9BWS9 393 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 FRMD8P1Q9BZ68 369 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PRRG3Q9BZD7 231 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 CEP44Q9C0F1 390 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 EPB41L1Q9H4G0 881 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 TUT1Q9H6E5 874 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 TLE6Q9H808 572 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 FBRSL1Q9HCM7 1045 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SSU72Q9NP77 194 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 CIDEBQ9UHD4 219 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PMF1-BGLAPU3KQ54 211 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 A0A0A0MRY4 1105 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 LACTBL1A8MY62 500 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 NRP1O14786 923 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SNPHO15079 494 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 DYNC1LI2O43237 492 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ASS1P00966 412 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PENKP01210 267 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 VDRP11473 427 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 NFKB1P19838 968 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 NAMPTP43490 491 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 CLCN2P51788 898 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ZNF143P52747 638 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ADIGQ0VDE8 80 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SIM2Q14190 667 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PFKFB4Q16877 469 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 DENND6AQ8IWF6 608 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ATPAF2Q8N5M1 289 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 GPRC5AQ8NFJ5 357 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 RAET1EQ8TD07 263 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 TRPC4APQ8TEL6 797 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ISOC1Q96CN7 298 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 RMDN1Q96DB5 314 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PIWIL1Q96J94 861 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SPATA13Q96N96 652 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 FIZ1Q96SL8 496 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SYT11Q9BT88 431 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SLC25A23Q9BV35 468 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 RASSF1Q9NS23 344 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ZDHHC2Q9UIJ5 367 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 CNOT6Q9ULM6 557 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PPP2R3BQ9Y5P8 575 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 MYH11P35749 1972 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PRRC2BQ5JSZ5 2229 aaKnown RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 CNTRLQ7Z7A1 2325 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 VILLO15195 856 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 TBX1O43435 398 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 IDH3BO43837 385 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SH3BGRLO75368 114 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ITGBL1O95965 494 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-201ENST00000317716 SUPT20HL2P0C7V6 817 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 GSTT2P0CG29 244 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 GSTT2BP0CG30 244 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 ELNP15502 786 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 YWHAQP27348 245 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 POU1F1P28069 291 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 AP3M2P53677 418 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 COPZ1P61923 177 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 TMEM132BQ14DG7 1078 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 PCLAFQ15004 111 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 INAQ16352 499 aa7.59□□□□□ -1.19
CDHR3-201ENST00000317716 TNFAIP8L3Q5GJ75 292 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms