RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 NADSYN1Q6IA69 706 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 TMEM53Q6P2H8 277 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 KLHDC10Q6PID8 442 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 OTOAQ7RTW8 1153 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 C4orf33Q8N1A6 199 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 OR6Y1Q8NGX8 325 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 USP33Q8TEY7 942 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 SNRNP27Q8WVK2 155 aaKnown RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 AUTS2Q8WXX7 1259 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 ZNF558Q96NG5 402 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 BTBD9Q96Q07 612 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 CYTH2Q99418 400 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 HERC2P3Q9BVR0 1158 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 TRABDQ9H4I3 376 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 CATSPERBQ9H7T0 1116 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 PPCSQ9HAB8 311 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 UGT1A7Q9HAW7 530 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 UGT1A10Q9HAW8 530 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 UGT1A8Q9HAW9 530 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 SLCO1B3Q9NPD5 702 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 THEGQ9P2T0 379 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 AFF4Q9UHB7 1163 aaKnown RBP13.21□□□□□ -0.29
CPNE1-201ENST00000317677 CROTQ9UKG9 612 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 DMTF1Q9Y222 760 aa13.21□□□□□ -0.29
CPNE1-201ENST00000317677 IGLV3-10A0A075B6K4 115 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 MATN2O00339 956 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 TLR5O60602 858 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 SPAG6O75602 509 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 OR6B1O95007 311 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 GJB5O95377 273 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 APOEP02649 317 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 VCLP18206 1134 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 PGM1P36871 562 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 KCNQ1P51787 676 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 SESN2P58004 480 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 SPOUT1Q5T280 376 aaKnown RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 C6orf163Q5TEZ5 329 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 RAP1GAP2Q684P5 730 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 STEAP4Q687X5 459 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 PSRC1Q6PGN9 363 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 UGT2A3Q6UWM9 527 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 RBM44Q6ZP01 1051 aaKnown RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 C16orf59Q7L2K0 433 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 OTOP3Q7RTS5 596 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 LRRC6Q86X45 466 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 TMPRSS6Q8IU80 811 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 KLHDC8BQ8IXV7 354 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 OXNAD1Q96HP4 312 aaPredicted RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 DNAJC1Q96KC8 554 aaKnown RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 SYBUQ9NX95 663 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 PCDHA11Q9Y5I1 949 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 PLXNA4Q9HCM2 1894 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 CACNG3O60359 315 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 AP2A1O95782 977 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 PEX11BO96011 259 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 TFAP2AP05549 437 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 LINC00271P0C7V0 271 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 SMIM18P0DKX4 95 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 CSH1P0DML2 217 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 CSH2P0DML3 217 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 CCNCP24863 283 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 ARFIP2P53365 341 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 ZNF33AQ06730 810 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 FBXL22Q6P050 247 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 DHRS4L2Q6PKH6 230 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 TRIM67Q6ZTA4 783 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 RASSF3Q86WH2 238 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 CMTR2Q8IYT2 770 aaKnown RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 DEFB123Q8N688 67 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 OR52K1Q8NGK4 314 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 DHRS1Q96LJ7 313 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 IL12RB2Q99665 862 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 CGREF1Q99674 301 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 SSU72Q9NP77 194 aaKnown RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 OLA1Q9NTK5 396 aaKnown RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 TRHDEQ9UKU6 1024 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 MTO1Q9Y2Z2 717 aaKnown RBP13.2□□□□□ -0.3
CPNE1-201ENST00000317677 MAD1L1Q9Y6D9 718 aa13.2□□□□□ -0.3
CPNE1-201ENST00000317677 CHD5Q8TDI0 1954 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 FAM159BA6NKW6 160 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 MTSS1O43312 755 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 TYROBPO43914 113 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 PEX1O43933 1283 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 PDE5AO76074 875 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 SLC2A3P11169 496 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 KRT15P19012 456 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 HALP42357 657 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 KIAA1841Q6NSI8 718 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 SH2D5Q6ZV89 423 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 TFAP2DQ7Z6R9 452 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-201ENST00000317677 ATPAF2Q8N5M1 289 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 LZTR1Q8N653 840 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 ATP6V0D2Q8N8Y2 350 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 ZNF461Q8TAF7 563 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 ZNF75CPQ92670 426 aaPredicted RBP13.19□□□□□ -0.3
CPNE1-201ENST00000317677 BTN2A3PQ96KV6 586 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 FERMT1Q9BQL6 677 aa13.19□□□□□ -0.3
CPNE1-201ENST00000317677 MTIF3Q9H2K0 278 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms