RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 LCLAT1Q6UWP7 414 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 NOL6Q9H6R4 1146 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 HSPE1-MOB4S4R3N1 261 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 H0YC42 278 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 FARP2O94887 1054 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 PSMA1P25786 263 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 KCNA1Q09470 495 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 TRIM25Q14258 630 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 NDUFAF6Q330K2 333 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 IYDQ6PHW0 289 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 AVL9Q8NBF6 648 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF512Q96ME7 567 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 IPPQ9Y573 584 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 M0QYT0 321 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 PAPSS1O43252 624 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 RNASEH1O60930 286 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 SGPL1O95470 568 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ATP6V1B1P15313 513 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 TIE1P35590 1138 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 HSD17B2P37059 387 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 GSTM5P46439 218 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF284Q2VY69 593 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 CYP4A22Q5TCH4 519 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 SCN4BQ8IWT1 228 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 IPMKQ8NFU5 416 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 DEPDC7Q96QD5 511 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 NFKBIZQ9BYH8 718 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 SLC2A11Q9BYW1 496 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 SHCBP1LQ9BZQ2 653 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 IL17RBQ9NRM6 502 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 MARCOQ9UEW3 520 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 KIAA0100Q14667 2235 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 TCRBV9S1A1TA0A576 114 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 DPYSL4O14531 572 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 PAPSS2O95340 614 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 PIGRP01833 764 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 TWF1Q12792 350 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ASTE1Q2TB18 679 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 NOP9Q86U38 636 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 PEX5LQ8IYB4 626 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 SEPT12Q8IYM1 358 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 BEND7Q8N7W2 519 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ZFP42Q96MM3 310 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 QTRT2Q9H974 415 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 MIEF1Q9NQG6 463 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 RAB23Q9ULC3 237 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 RGPD3A6NKT7 1758 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 RGPD4Q7Z3J3 1758 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 F8W810 466 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ITGA2BP08514 1039 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 FGFR1P11362 822 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ADORA2BP29275 332 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF438Q7Z4V0 828 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ATG16L2Q8NAA4 619 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ZBTB10Q96DT7 871 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 BBS2Q9BXC9 721 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 DPY30Q9C005 99 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 CCDC59Q9P031 241 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 TSPAN16Q9UKR8 245 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ZNF232Q9UNY5 417 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 WNK3Q9BYP7 1800 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 LOC100653049A0A140TA62 436 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 GRK4P32298 578 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 USP45Q70EL2 814 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 CBWD2Q8IUF1 395 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ABHD8Q96I13 439 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 IL1RAPQ9NPH3 570 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 ANKRD31Q8N7Z5 1873 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 LYPLA1O75608 230 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 CCNDBP1O95273 360 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 UBTFL6P0CB48 400 aaPredicted RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 MIPP30301 263 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 KLK7P49862 253 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 EIF5AP63241 154 aaKnown RBP8.89□□□□□ -0.99
COL6A5-202ENST00000312481 NR6A1Q15406 480 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 TSHZ1Q6ZSZ6 1077 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 SLC26A9Q7LBE3 791 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 RNF180Q86T96 592 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 GPSM1Q86YR5 675 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 GALNT4Q8N4A0 578 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 C4orf32Q8N8J7 132 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 SH3KBP1Q96B97 665 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 UBIAD1Q9Y5Z9 338 aa8.89□□□□□ -0.99
COL6A5-202ENST00000312481 CLDN25C9JDP6 229 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 ERAP2Q6P179 960 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 TMC7Q7Z402 723 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 TMEM161BQ8NDZ6 487 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 NXF3Q9H4D5 531 aaKnown RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 OPTCQ9UBM4 332 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 GULP1Q9UBP9 304 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 C8BP07358 591 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 GSTM1P09488 218 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 IMPDH2P12268 514 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 ICAM3P32942 547 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 GSTM4Q03013 218 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 PRKCQQ04759 706 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 SCN1BQ07699 218 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 CAMK2GQ13555 558 aaPredicted RBP8.88□□□□□ -0.99
COL6A5-202ENST00000312481 C16orf72Q14CZ0 275 aa8.88□□□□□ -0.99
COL6A5-202ENST00000312481 MON1BQ7L1V2 547 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms