RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PIH1D2Q8WWB5 315 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 AZIN2Q96A70 460 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 GSAPA4D1B5 854 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 H3BRB1 525 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 PEX10O60683 326 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 RNASEH1O60930 286 aaKnown RBP12.73□□□□□ -0.37
USP38-201ENST00000307017 MTHFRP42898 656 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 CDH17Q12864 832 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 TOP1MTQ969P6 601 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 KLHL5Q96PQ7 755 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 MRPL45Q9BRJ2 306 aaKnown RBP12.73□□□□□ -0.37
USP38-201ENST00000307017 EHD1Q9H4M9 534 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 KLHL28Q9NXS3 571 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 PLK2Q9NYY3 685 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 RSL24D1Q9UHA3 163 aaKnown RBP12.73□□□□□ -0.37
USP38-201ENST00000307017 MAP3K4Q9Y6R4 1608 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 LRRC14BA6NHZ5 514 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 IFNA14P01570 189 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 HGFP14210 728 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 CDH3P22223 829 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 MCCD1P59942 119 aaPredicted RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 NAE1Q13564 534 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 SIM2Q14190 667 aaPredicted RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 SUZ12Q15022 739 aaKnown RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 GALNT18Q6P9A2 607 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 WDR49Q8IV35 697 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 RGL4Q8IZJ4 473 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 NYAP2Q9P242 653 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 RAD54BQ9Y620 910 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ADM5C9JUS6 153 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 GPR182O15218 404 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ACSL4O60488 711 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 SCN2BO60939 215 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ADCYAP1R1P41586 468 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 MMP13P45452 471 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 WSCD1Q658N2 575 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ERICH5Q6P6B1 374 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ANKRD46Q86W74 232 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 GPR65Q8IYL9 337 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ETNPPLQ8TBG4 499 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 PTPN18Q99952 460 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 FEM1AQ9BSK4 669 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ASB8Q9H765 288 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ERVK-5Q9HDB9 667 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 SLC24A2Q9UI40 661 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 SAMHD1Q9Y3Z3 626 aaKnown RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 AP4B1Q9Y6B7 739 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 OAS3Q9Y6K5 1087 aaKnown RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 ABCC3O15438 1527 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 TBL1XO60907 577 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 NR2F1P10589 423 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 TROAPQ12815 778 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ADRM1Q16186 407 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 SBK1Q52WX2 424 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 AKAP14Q86UN6 197 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 MAML3Q96JK9 1138 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 C12orf4Q9NQ89 552 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 DRG1Q9Y295 367 aaKnown RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 A8MV72 311 aaPredicted RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 HIST1H2ABP04908 130 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 SLC26A3P40879 764 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 TAS2R41P59536 307 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 BCL2L1Q07817 233 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 RAET1GQ6H3X3 334 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 HIST3H2AQ7L7L0 130 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 EEF1AKMT1Q8WVE0 214 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 HIST1H2ACQ93077 130 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 VAT1Q99536 393 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 SYNPO2Q9UMS6 1093 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 OR10H2O60403 315 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 URODP06132 367 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 TFEBP19484 476 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 KDELR1P24390 212 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 RCAN1P53805 252 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 RPL7AP62424 266 aaKnown RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 ITGA7Q13683 1181 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 FRG1Q14331 258 aaKnown RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 FASTKD3Q14CZ7 662 aaKnown RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 CERCAMQ5T4B2 595 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 SMARCD3Q6STE5 483 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 CIR1Q86X95 450 aaPredicted RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 ZNF655Q8N720 491 aaPredicted RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 LNX1Q8TBB1 728 aaPredicted RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 BAP1Q92560 729 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ENTPD4Q9Y227 616 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 CCDC189A1A4V9 331 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 SAP18O00422 153 aaKnown RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 SLITRK3O94933 977 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 OR56A5P0C7T3 313 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 WASP42768 502 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 PSME3P61289 254 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 EGFLAMQ63HQ2 1017 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 CHERPQ8IWX8 916 aaKnown RBP12.72□□□□□ -0.37
USP38-201ENST00000307017 COLGALT2Q8IYK4 626 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 KBTBD7Q8WVZ9 684 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 RNPEPL1Q9HAU8 725 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ALKBH4Q9NXW9 302 aa12.72□□□□□ -0.37
USP38-201ENST00000307017 ZBTB14O43829 449 aa12.71□□□□□ -0.37
USP38-201ENST00000307017 SNRPB2P08579 225 aaKnown RBP12.71□□□□□ -0.37
USP38-201ENST00000307017 SERPINF2P08697 491 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms