RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SMAD3P84022 425 aaKnown RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 NFYCQ13952 458 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 LAYNQ6UX15 382 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 CCDC185Q8N715 623 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 MAB21L3Q8N8X9 362 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 MYLPFQ96A32 169 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 BTBD9Q96Q07 612 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 LMAN2LQ9H0V9 348 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 NMRAL1Q9HBL8 299 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 GGT7Q9UJ14 662 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 USP15Q9Y4E8 981 aaPredicted RBP8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 PCDHA3Q9Y5H8 950 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 N6AMT1Q9Y5N5 214 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 SGTAO43765 313 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 JCHAINP01591 159 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 SPATA31C1P0DKV0 1188 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 ARHGAP1Q07960 439 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 DNAJC3Q13217 504 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 LPIN1Q14693 890 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 CHI3L2Q15782 390 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 GRTP1Q5TC63 336 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 JAMLQ86YT9 394 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 RASGEF1AQ8N9B8 481 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 OR52L1Q8NGH7 329 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 FAR1Q8WVX9 515 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 SPATA5L1Q9BVQ7 753 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 RIBC2Q9H4K1 309 aa8.4□□□□□ -1.06
PCDHB1-201ENST00000306549 OR10H2O60403 315 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 GAD2Q05329 585 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 KLC1Q07866 573 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 NR6A1Q15406 480 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 TRPC4APQ8TEL6 797 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 COPS5Q92905 334 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 DNAJC19Q96DA6 116 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 PDLIM2Q96JY6 352 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 SNX27Q96L92 541 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 FAIM2Q9BWQ8 316 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 MIR1-1HGQ9H1L0 117 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 ADPRHL2Q9NX46 363 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 COL24A1Q17RW2 1714 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 ZBTB39O15060 712 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 DGKAP23743 735 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 SOX11P35716 441 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 MGAT5Q09328 741 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 TAB1Q15750 504 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 FAM35AQ86V20 835 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 HMG20AQ9NP66 347 aa8.4□□□□□ -1.07
PCDHB1-201ENST00000306549 A0A1B0GVM2 712 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 TCAF2A6NFQ2 919 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ANKDD1BA6NHY2 528 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 OR6B1O95007 311 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 RPIAP49247 311 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SPIRE1Q08AE8 756 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ITGB3BPQ13352 177 aaPredicted RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PDGFRLQ15198 375 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PARP6Q2NL67 630 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PDZK1Q5T2W1 519 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 KIAA1324Q6UXG2 1013 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SH3RF1Q7Z6J0 888 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 OVCA2Q8WZ82 227 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 MLPHQ9BV36 600 aaPredicted RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ULBP1Q9BZM6 244 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 KLHL1Q9NR64 748 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 CHADO15335 359 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 TSPAN1O60635 241 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 DGKKQ5KSL6 1271 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 VARS2Q5ST30 1063 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ECHDC2Q86YB7 292 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SVOPQ8N4V2 548 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SHC3Q92529 594 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ELOVL2Q9NXB9 296 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 COLEC10Q9Y6Z7 277 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SOWAHBA6NEL2 793 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 LBPP18428 481 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 POLD2P49005 469 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 AP1S2P56377 157 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 DUSP4Q13115 394 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 TRIM16LQ309B1 348 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 GPR158Q5T848 1215 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ARMC3Q5W041 872 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SEL1L3Q68CR1 1132 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PAGE2Q7Z2X7 111 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 LONP2Q86WA8 852 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PRICKLE1Q96MT3 831 aaPredicted RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 CPNE1Q99829 537 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 TTLL2Q9BWV7 592 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PNPLA8Q9NP80 782 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 FANCFQ9NPI8 374 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 AASDHPPTQ9NRN7 309 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PHPT1Q9NRX4 125 aaPredicted RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 RREB1Q92766 1687 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SMIM28A0A1B0GU29 152 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 HNRNPH1P31943 449 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 LILRA4P59901 499 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 RAB2AP61019 212 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SRSF11Q05519 484 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 MBTD1Q05BQ5 628 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PTPN21Q16825 1174 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 LONRF1Q17RB8 773 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 INTS6LQ5JSJ4 861 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms