RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MYL4P12829 197 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 XRCC1P18887 633 aaPredicted RBP13.59□□□□□ -0.23
CTDP1-202ENST00000299543 BRCC3P46736 316 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 NPY2RP49146 381 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 TSPY1Q01534 308 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 ZNF470Q6ECI4 717 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 AAGABQ6PD74 315 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 PATL1Q86TB9 770 aaKnown RBP13.59□□□□□ -0.23
CTDP1-202ENST00000299543 ZC3HC1Q86WB0 502 aaKnown RBP13.59□□□□□ -0.23
CTDP1-202ENST00000299543 ATPAF2Q8N5M1 289 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 TTC16Q8NEE8 873 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 EMID1Q96A84 441 aaPredicted RBP13.59□□□□□ -0.23
CTDP1-202ENST00000299543 SLC2A13Q96QE2 648 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 MPP6Q9NZW5 540 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 ADAM28Q9UKQ2 775 aa13.59□□□□□ -0.23
CTDP1-202ENST00000299543 SMIM31A0A1B0GVY4 71 aa13.58□□□□□ -0.23
CTDP1-202ENST00000299543 TRMUO75648 421 aaKnown RBP13.58□□□□□ -0.23
CTDP1-202ENST00000299543 DDHD2O94830 711 aa13.58□□□□□ -0.23
CTDP1-202ENST00000299543 THP07101 528 aa13.58□□□□□ -0.23
CTDP1-202ENST00000299543 KCNE1P15382 129 aa13.58□□□□□ -0.23
CTDP1-202ENST00000299543 CDC42EP1Q00587 391 aa13.58□□□□□ -0.23
CTDP1-202ENST00000299543 SMUG1Q53HV7 270 aa13.58□□□□□ -0.23
CTDP1-202ENST00000299543 LIPMQ5VYY2 423 aa13.58□□□□□ -0.23
CTDP1-202ENST00000299543 RYBPQ8N488 228 aaPredicted RBP13.58□□□□□ -0.23
CTDP1-202ENST00000299543 NT5C3BQ969T7 300 aa13.58□□□□□ -0.23
CTDP1-202ENST00000299543 RBM38Q9H0Z9 239 aaKnown RBP13.58□□□□□ -0.23
CTDP1-202ENST00000299543 FAIMQ9NVQ4 179 aa13.58□□□□□ -0.23
CTDP1-202ENST00000299543 A0A1W2PQ67 120 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 TTC24A2A3L6 582 aaPredicted RBP13.58□□□□□ -0.24
CTDP1-202ENST00000299543 RGSL1A5PLK6 1076 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 PORP16435 677 aaPredicted RBP13.58□□□□□ -0.24
CTDP1-202ENST00000299543 STMN1P16949 149 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 ALDH1A3P47895 512 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 CCL14Q16627 93 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 PGM2L1Q6PCE3 622 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 LDB1Q86U70 411 aaPredicted RBP13.58□□□□□ -0.24
CTDP1-202ENST00000299543 CEP97Q8IW35 865 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 HEPHQ9BQS7 1158 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 NDEL1Q9GZM8 345 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 RBM22Q9NW64 420 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTDP1-202ENST00000299543 GTF2IRD1Q9UHL9 959 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 RAP2CQ9Y3L5 183 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 WDR90Q96KV7 1748 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 FAM95CA0A1B0GW59 222 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 A8MU76 341 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 AURKAO14965 403 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 NCAM2O15394 837 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 DLX3O60479 287 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 OXSR1O95747 527 aaPredicted RBP13.58□□□□□ -0.24
CTDP1-202ENST00000299543 GABRB3P28472 473 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 RELAQ04206 551 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 OGFOD2Q6N063 350 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 BNC2Q6ZN30 1099 aaPredicted RBP13.58□□□□□ -0.24
CTDP1-202ENST00000299543 SCN4BQ8IWT1 228 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 BHLHE22Q8NFJ8 381 aaPredicted RBP13.58□□□□□ -0.24
CTDP1-202ENST00000299543 SERPINI1Q99574 410 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 RTKNQ9BST9 563 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 AP5M1Q9H0R1 490 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 CNGB3Q9NQW8 809 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 TRHDEQ9UKU6 1024 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 TTC3P53804 2025 aa13.58□□□□□ -0.24
CTDP1-202ENST00000299543 MATN2O00339 956 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 F2P00734 622 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 HDCP19113 662 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 EIF2B2P49770 351 aaKnown RBP13.57□□□□□ -0.24
CTDP1-202ENST00000299543 MAXP61244 160 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 SLC12A1Q13621 1099 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 GRM2Q14416 872 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 OR6P1Q8NGX9 317 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 JADE3Q92613 823 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 MYLPFQ96A32 169 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 CENPOQ9BU64 300 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 PAIP1Q9H074 479 aaKnown RBP13.57□□□□□ -0.24
CTDP1-202ENST00000299543 NDFIP2Q9NV92 336 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 MAGEB16A2A368 324 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 C17orf102A2RUQ5 167 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 C9IYK1 514 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 FBXO21O94952 628 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 SLC35E2BP0CK96 405 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 RPL34P49207 117 aaKnown RBP13.57□□□□□ -0.24
CTDP1-202ENST00000299543 GJA9P57773 515 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 TAS2R39P59534 338 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 C6orf52Q5T4I8 152 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 TFAP2DQ7Z6R9 452 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 KCTD13Q8WZ19 329 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 TMEM209Q96SK2 561 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 TBL1YQ9BQ87 522 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 TRPV6Q9H1D0 765 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 RHOJQ9H4E5 214 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 TRNAU1APQ9NX07 287 aaKnown RBP13.57□□□□□ -0.24
CTDP1-202ENST00000299543 SF3B1O75533 1304 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTDP1-202ENST00000299543 ATP6AP2A0A1C7CYW4 349 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 A6NL46 340 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 M0QZ92 97 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 MTSS1O43312 755 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 ATP6AP2O75787 350 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 AXLP30530 894 aa13.57□□□□□ -0.24
CTDP1-202ENST00000299543 RPL5P46777 297 aaKnown RBP13.57□□□□□ -0.24
CTDP1-202ENST00000299543 CSE1LP55060 971 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms