RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 EPHA3P29320 983 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 SLC12A2P55011 1212 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 AQP4P55087 323 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 MGAT3Q09327 533 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 DLG1Q12959 904 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 TAF10Q12962 218 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 CSHL1Q14406 222 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 SPANXN3Q5MJ09 141 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 VARS2Q5ST30 1063 aaKnown RBP10.21□□□□□ -0.77
FOXN4-201ENST00000299162 DCLRE1AQ6PJP8 1040 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 IQCF2Q8IXL9 164 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 ARHGAP18Q8N392 663 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 DBF4BQ8NFT6 615 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 NTAN1Q96AB6 310 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 HDAC11Q96DB2 347 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 HMCESQ96FZ2 354 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 CNBD2Q96M20 576 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 CPNE1Q99829 537 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 ABCC13Q9NSE7 274 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 PAIP2BQ9ULR5 123 aaKnown RBP10.21□□□□□ -0.77
FOXN4-201ENST00000299162 TMCO1Q9UM00 188 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 ITM2BQ9Y287 266 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 CRYL1Q9Y2S2 319 aa10.21□□□□□ -0.77
FOXN4-201ENST00000299162 DYTNA2CJ06 578 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 SPECC1L-ADORA2AF8WAN1 911 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 CFLARO15519 480 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 PEX1O43933 1283 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 PQBP1O60828 265 aaKnown RBP10.21□□□□□ -0.78
FOXN4-201ENST00000299162 AHSGP02765 367 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 MLNP12872 115 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 PEX2P28328 305 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 TBX4P57082 545 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 CYTH1Q15438 398 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 FAM171BQ6P995 826 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 TMEM173Q86WV6 379 aaPredicted RBP10.21□□□□□ -0.78
FOXN4-201ENST00000299162 PHTF2Q8N3S3 785 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 GALNT4Q8N4A0 578 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 BLOC1S5Q8TDH9 187 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 PHF21BQ96EK2 531 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 SMIM14Q96QK8 99 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 KLHL4Q9C0H6 718 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 CCSER2Q9H7U1 834 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 NMRAL1Q9HBL8 299 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 ARHGEF38Q9NXL2 777 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 DCDC2Q9UHG0 476 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 KIAA0100Q14667 2235 aaKnown RBP10.21□□□□□ -0.78
FOXN4-201ENST00000299162 ANKRD12Q6UB98 2062 aa10.21□□□□□ -0.78
FOXN4-201ENST00000299162 TSPAN3O60637 253 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 TMCC1O94876 653 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 PROCP04070 461 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 HNRNPLP14866 589 aaKnown RBP eCLIP10.2□□□□□ -0.78
FOXN4-201ENST00000299162 SERPINB8P50452 374 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 SP3Q02447 781 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 PIK3R6Q5UE93 754 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 TMEM198Q66K66 360 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 ARHGAP12Q8IWW6 846 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 PANX3Q96QZ0 392 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 SLC9A7Q96T83 725 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 GLOD4Q9HC38 313 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 PLA2G4CQ9UP65 541 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 BOLA2-SMG1P6H3BVE0 249 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 KPNA6O60684 536 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 STAMBPO95630 424 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 GSRP00390 522 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 HOXC8P31273 242 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 KCNQ1P51787 676 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 WNT3AP56704 352 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 ULK2Q8IYT8 1036 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 NXNL1Q96CM4 212 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 CRISPLD1Q9H336 500 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 CATSPERBQ9H7T0 1116 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 LIN28AQ9H9Z2 209 aaKnown RBP10.2□□□□□ -0.78
FOXN4-201ENST00000299162 CASS4Q9NQ75 786 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 SMPD4Q9NXE4 827 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 KCNK4Q9NYG8 393 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 LRFN2Q9ULH4 789 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 FAM155AB1AL88 458 aaPredicted RBP10.2□□□□□ -0.78
FOXN4-201ENST00000299162 AIM2O14862 343 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 NCAM2O15394 837 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 MAFKO60675 156 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 ALDH1A2O94788 518 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 SERPINE1P05121 402 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 GABRB3P28472 473 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 ACVRL1P37023 503 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 CDK7P50613 346 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 LIMK2P53671 638 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 ABCE1P61221 599 aaKnown RBP10.2□□□□□ -0.78
FOXN4-201ENST00000299162 GALNT3Q14435 633 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 SLC9B1Q4ZJI4 515 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 SFT2D3Q587I9 215 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 SPDYAQ5MJ70 313 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 RBM20Q5T481 1227 aaKnown RBP10.2□□□□□ -0.78
FOXN4-201ENST00000299162 GRTP1Q5TC63 336 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 STEAP4Q687X5 459 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 CNSTQ6PJW8 725 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 KYAT3Q6YP21 454 aaKnown RBP10.2□□□□□ -0.78
FOXN4-201ENST00000299162 CEP97Q8IW35 865 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 MAPK15Q8TD08 544 aa10.2□□□□□ -0.78
FOXN4-201ENST00000299162 PTCD3Q96EY7 689 aaKnown RBP10.2□□□□□ -0.78
FOXN4-201ENST00000299162 MYEOVQ96EZ4 313 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms