RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 DFFAO00273 331 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 KPNA4O00629 521 aaPredicted RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 WNT10BO00744 389 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 GNGT2O14610 69 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 BAIAP3O94812 1187 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 VTNP04004 478 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 MTHFD1P11586 935 aaKnown RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 NCK1P16333 377 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 ERCC2P18074 760 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 GJA8P48165 433 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 IREB2P48200 963 aaKnown RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 RAB10P61026 200 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 LSM3P62310 102 aaKnown RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 ADIGQ0VDE8 80 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 PCSK7Q16549 785 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 TREML2Q5T2D2 321 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 ELMSAN1Q6PJG2 1045 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 CNSTQ6PJW8 725 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 CUZD1Q86UP6 607 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 FAM35AQ86V20 835 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 OR6P1Q8NGX9 317 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 TFAP2CQ92754 450 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 SDCCAG3Q96C92 435 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 TUBGCP3Q96CW5 907 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 CCDC97Q96F63 343 aaPredicted RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 GPRC5DQ9NZD1 345 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 VPS28Q9UK41 221 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 ANKRD6Q9Y2G4 727 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 ST14Q9Y5Y6 855 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 RBM47A0AV96 593 aaKnown RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 B4GAT1O43505 415 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 PCNAP12004 261 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 ATP6V1B2P21281 511 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 BACE1P56817 501 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 ITKQ08881 620 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 TNFAIP1Q13829 316 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 FRG1Q14331 258 aaKnown RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 FAM219BQ5XKK7 198 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 NAPEPLDQ6IQ20 393 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 NANOGP8Q6NSW7 305 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 GABPB2Q8TAK5 448 aaPredicted RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 RDH11Q8TC12 318 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 FSD1LQ9BXM9 530 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 DPEP3Q9H4B8 488 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 AS3MTQ9HBK9 375 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 SETD4Q9NVD3 440 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 TBC1D13Q9NVG8 400 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 UTP6Q9NYH9 597 aaKnown RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 GIMAP2Q9UG22 337 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 SNX5Q9Y5X3 404 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 CNTNAP1P78357 1384 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 GREB1LQ9C091 1923 aaPredicted RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 HTR3EA5X5Y0 456 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 SLC22A2O15244 555 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 SERPINB7O75635 380 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 AP2A1O95782 977 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 AHSGP02765 367 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 NCAM1P13591 858 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 PRKAA2P54646 552 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 PITX1P78337 314 aaPredicted RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 RFTN1Q14699 578 aaPredicted RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 HSDL1Q3SXM5 330 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 HMBOX1Q6NT76 420 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 PPP4R4Q6NUP7 873 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 ERMP1Q7Z2K6 904 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 LYSMD3Q7Z3D4 306 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 KDM1BQ8NB78 822 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 SLC2A14Q8TDB8 520 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 SEPT8Q92599 483 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 HDAC10Q969S8 669 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 HEPHQ9BQS7 1158 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 RAD21L1Q9H4I0 556 aa11.5□□□□□ -0.57
TRUB1-201ENST00000298746 MTF2Q9Y483 593 aaPredicted RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 GPC6Q9Y625 555 aaPredicted RBP11.5□□□□□ -0.57
TRUB1-201ENST00000298746 STRCQ7RTU9 1775 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 LSM1O15116 133 aaKnown RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 HUS1O60921 280 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 LDLRP01130 860 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 ATP5F1P24539 256 aaPredicted RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 NFKBIAP25963 317 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 PTPN3P26045 913 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 TAS2R39P59534 338 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 CDH17Q12864 832 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 IMPG1Q17R60 797 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 STK32CQ86UX6 486 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 ZC3HC1Q86WB0 502 aaKnown RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 CPSF7Q8N684 471 aaKnown RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 PNPLA1Q8N8W4 532 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 TERB1Q8NA31 727 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 TXNDC5Q8NBS9 432 aaKnown RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 ZNF280CQ8ND82 737 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 HEXDCQ8WVB3 486 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 NPLQ9BXD5 320 aaPredicted RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 IL22Q9GZX6 179 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 PRM3Q9NNZ6 103 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 PRMT7Q9NVM4 692 aaPredicted RBP11.49□□□□□ -0.57
TRUB1-201ENST00000298746 ATP11BQ9Y2G3 1177 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 A0A0J9YYE9 177 aa11.49□□□□□ -0.57
TRUB1-201ENST00000298746 KANSL1LA0AUZ9 987 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms