RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 KCNJ5P48544 419 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 BDH1Q02338 343 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 CYP2A13Q16696 494 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 GFOD2Q3B7J2 385 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 ARSHQ5FYA8 562 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 CAVIN3Q969G5 261 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 TOP1MTQ969P6 601 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 PXMP2Q9NR77 195 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 HCN3Q9P1Z3 774 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 E2F3O00716 465 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 TRDMT1O14717 391 aaKnown RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 PABPC1LQ4VXU2 614 aaKnown RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 WASHC2DQ5SRD0 308 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 NYAP1Q6ZVC0 841 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 ZNF410Q86VK4 478 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 MSL3Q8N5Y2 521 aaKnown RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 SMPDL3BQ92485 455 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 ADAM7Q9H2U9 754 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 DDX43Q9NXZ2 648 aaKnown RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 PCDHB11Q9Y5F2 797 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 RECQL5O94762 991 aaPredicted RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 PAEPP09466 180 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 NPR3P17342 541 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 BUD31P41223 144 aaPredicted RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 CDK16Q00536 496 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 ZPBP2Q6X784 338 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 KCNMB4Q86W47 210 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 BRSK1Q8TDC3 778 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 MYLPFQ96A32 169 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 PPP1R14BQ96C90 147 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 DCUN1D5Q9BTE7 237 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 PCDHGB5Q9Y5G0 923 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 PAX3P23760 479 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 HNRNPH1P31943 449 aaKnown RBP12.15□□□□□ -0.46
PCF11-201ENST00000298281 GNALP38405 381 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 SLC1A6P48664 564 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 LAMTOR4Q0VGL1 99 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 CHAF1BQ13112 559 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 TTI2Q6NXR4 508 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 USP45Q70EL2 814 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 DHFR2Q86XF0 187 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 LDAHQ9H6V9 325 aa12.15□□□□□ -0.46
PCF11-201ENST00000298281 MED24O75448 989 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 MYL6P60660 151 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 BNIP2Q12982 314 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 CBWD6Q4V339 395 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 ATG14Q6ZNE5 492 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 NIPA1Q7RTP0 329 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 FAM83AQ86UY5 434 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 ADCY4Q8NFM4 1077 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 BSNDQ8WZ55 320 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 C5orf34Q96MH7 638 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 TMEM216Q9P0N5 145 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 PFDN2Q9UHV9 154 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 MRTO4Q9UKD2 239 aaKnown RBP12.15□□□□□ -0.47
PCF11-201ENST00000298281 DHRS7Q9Y394 339 aa12.15□□□□□ -0.47
PCF11-201ENST00000298281 SLC9A3R1O14745 358 aaPredicted RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 PHGDHO43175 533 aaKnown RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 CYP2C18P33260 490 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 PEX6Q13608 980 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 KYAT3Q6YP21 454 aaKnown RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 MTDHQ86UE4 582 aaKnown RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 METTL6Q8TCB7 284 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 FBXO25Q8TCJ0 367 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 EFHD2Q96C19 240 aaPredicted RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 ARID1BQ8NFD5 2236 aaPredicted RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 H0Y858 1186 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 MT-CO1P00395 513 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 AMHP03971 560 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 POU6F1Q14863 301 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 BEND4Q6ZU67 534 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 JAZF1Q86VZ6 243 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 LRRC17Q8N6Y2 441 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 CDYL2Q8N8U2 506 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 CPB2Q96IY4 423 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 L2HGDHQ9H9P8 463 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 SMPD4Q9NXE4 827 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 PPP1R14DQ9NXH3 145 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 ECHS1P30084 290 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 HNF4AP41235 474 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 ELK3P41970 407 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 GCNT1Q02742 428 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 FRG1Q14331 258 aaKnown RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 ALG10Q5BKT4 473 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 DEFB107AQ8IZN7 70 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 AADATQ8N5Z0 425 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 PMEPA1Q969W9 287 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 ART5Q96L15 291 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 CATSPER2Q96P56 530 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 GAS2L1Q99501 681 aaPredicted RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 APOL2Q9BQE5 337 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 UMODL1Q5DID0 1318 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 A0A087X1B8 175 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 VTNP04004 478 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 GRK5P34947 590 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 RPL3P39023 403 aaKnown RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 DGCR6Q14129 220 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 FASTKQ14296 549 aaKnown RBP12.14□□□□□ -0.47
PCF11-201ENST00000298281 RAB39AQ14964 217 aa12.14□□□□□ -0.47
PCF11-201ENST00000298281 SV2AQ7L0J3 742 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms