RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 CCNFP41002 786 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 PTDSS1P48651 473 aaKnown RBP9.39□□□□□ -0.91
PRDM9-201ENST00000296682 KIF19Q2TAC6 998 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 ACSBG2Q5FVE4 666 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 STXBP5Q5T5C0 1151 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 GPR158Q5T848 1215 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 TIGD7Q6NT04 549 aaPredicted RBP9.39□□□□□ -0.91
PRDM9-201ENST00000296682 ACAD11Q709F0 780 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 SNX32Q86XE0 403 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 BBS5Q8N3I7 341 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 TMEM169Q96HH4 297 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 DNAJC1Q96KC8 554 aaKnown RBP9.39□□□□□ -0.91
PRDM9-201ENST00000296682 CINPQ9BW66 212 aaPredicted RBP9.39□□□□□ -0.91
PRDM9-201ENST00000296682 TLL2Q9Y6L7 1015 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 SDK1Q7Z5N4 2213 aa9.39□□□□□ -0.91
PRDM9-201ENST00000296682 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 MAGEB16A2A368 324 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 SIN3BO75182 1162 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 CKMP06732 381 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 SLC2A3P11169 496 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 SELPP16109 830 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 CCNCP24863 283 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ATP5C1P36542 298 aaKnown RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ALDH1A3P47895 512 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ZNF177Q13360 481 aaPredicted RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 PDAP1Q13442 181 aaKnown RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 DBN1Q16643 649 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 UGP2Q16851 508 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 FAM83EQ2M2I3 478 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 PPM1LQ5SGD2 360 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 SNX30Q5VWJ9 437 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 SEL1L3Q68CR1 1132 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 MBLAC2Q68D91 279 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ARHGAP12Q8IWW6 846 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 PCDH20Q8N6Y1 951 aaKnown RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 FAM156AQ8NDB6 213 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 TTPALQ9BTX7 342 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 TUBB6Q9BUF5 446 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 HIPK3Q9H422 1215 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 RNPEPL1Q9HAU8 725 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 CASS4Q9NQ75 786 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 RGS18Q9NS28 235 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 CCDC167Q9P0B6 97 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 AFF4Q9UHB7 1163 aaKnown RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 SOX13Q9UN79 622 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 SSX2IPQ9Y2D8 614 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ZFP37Q9Y6Q3 630 aaPredicted RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 WFS1O76024 890 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 GRK2P25098 689 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 IDH3AP50213 366 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ARSDP51689 593 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 NIPAL4Q0D2K0 466 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 RAB41Q5JT25 222 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 BRMS1LQ5PSV4 323 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 CLEC6AQ6EIG7 209 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 MRPL10Q7Z7H8 261 aaKnown RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ZC3HC1Q86WB0 502 aaKnown RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 IFNEQ86WN2 208 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 HPS6Q86YV9 775 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 HEXDCQ8WVB3 486 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ATP6V1E2Q96A05 226 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 MYEOVQ96EZ4 313 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 HBEGFQ99075 208 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 UNC93B1Q9H1C4 597 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ENTPD7Q9NQZ7 604 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 SIRPGQ9P1W8 387 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 VPS28Q9UK41 221 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 RPL26L1Q9UNX3 145 aaKnown RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 C15orf41Q9Y2V0 281 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ZNF189O75820 626 aaPredicted RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ALDH1A2O94788 518 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 RHOBTB1O94844 696 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 RHOCP08134 193 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 UBTFL6P0CB48 400 aaPredicted RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ACRP10323 421 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 TFEBP19484 476 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 RAB10P61026 200 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 STEAP4Q687X5 459 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 PM20D1Q6GTS8 502 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 SCML4Q8N228 414 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 LZTR1Q8N653 840 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 FBXO22Q8NEZ5 403 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 MAPK15Q8TD08 544 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 STON2Q8WXE9 905 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 ZNF419Q96HQ0 510 aaPredicted RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 LENG8Q96PV6 779 aaPredicted RBP9.38□□□□□ -0.91
PRDM9-201ENST00000296682 MCMBPQ9BTE3 642 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 RHOJQ9H4E5 214 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 STOML1Q9UBI4 398 aa9.38□□□□□ -0.91
PRDM9-201ENST00000296682 FAM155AB1AL88 458 aaPredicted RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 FGF10O15520 208 aaPredicted RBP9.37□□□□□ -0.91
PRDM9-201ENST00000296682 NBNO60934 754 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 NDUFS3O75489 264 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 TGDSO95455 350 aa9.37□□□□□ -0.91
PRDM9-201ENST00000296682 SERPINF2P08697 491 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms