RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 FAM237BA0A1B0GVD1 139 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 ILVBLA1L0T0 632 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 PRPF4O43172 522 aaKnown RBP eCLIP24.36■■□□□ 1.49
SHISA5-201ENST00000296444 ZMPSTE24O75844 475 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 VAPBO95292 243 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 PDHA1P08559 390 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 NQO1P15559 274 aaKnown RBP24.36■■□□□ 1.49
SHISA5-201ENST00000296444 CCND1P24385 295 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 GABRB3P28472 473 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 MGAT5Q09328 741 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 DLG2Q15700 870 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 LVRNQ6Q4G3 990 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 ARMC2Q8NEN0 867 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 ZFATQ9P243 1243 aa24.36■■□□□ 1.49
SHISA5-201ENST00000296444 IQANK1A0A1B0GTG1 560 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 AURKAO14965 403 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 TRIM24O15164 1050 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 SNRPAP09012 282 aaKnown RBP24.35■■□□□ 1.49
SHISA5-201ENST00000296444 GSTA2P09210 222 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 ZNF235Q14590 738 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 PKN3Q6P5Z2 889 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 CMC1Q7Z7K0 106 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 CMTM8Q8IZV2 173 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 TDRD5Q8NAT2 981 aaKnown RBP24.35■■□□□ 1.49
SHISA5-201ENST00000296444 CKAP2Q8WWK9 683 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 USP13Q92995 863 aaPredicted RBP24.35■■□□□ 1.49
SHISA5-201ENST00000296444 LRRC3BQ96PB8 259 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 SLCO1B3Q9NPD5 702 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 FCF1Q9Y324 198 aaKnown RBP24.35■■□□□ 1.49
SHISA5-201ENST00000296444 SMAD6O43541 496 aaKnown RBP24.35■■□□□ 1.49
SHISA5-201ENST00000296444 CTBP1Q13363 440 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 SPANXN3Q5MJ09 141 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 CYS1Q717R9 158 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 LINC00523Q86TU6 105 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 FATE1Q969F0 183 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 ZNF707Q96C28 371 aaPredicted RBP24.35■■□□□ 1.49
SHISA5-201ENST00000296444 ANKRD27Q96NW4 1050 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 PCMTD2Q9NV79 361 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 UBA2Q9UBT2 640 aaPredicted RBP24.35■■□□□ 1.49
SHISA5-201ENST00000296444 ZNF180Q9UJW8 692 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 PCDHGC4Q9Y5F7 938 aa24.35■■□□□ 1.49
SHISA5-201ENST00000296444 TRAV19A0A0A6YYK7 116 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 CCDC195A0A1B0GUA6 201 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 CARNS1A5YM72 827 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 VIMP08670 466 aaKnown RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 CD70P32970 193 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 ARCN1P48444 511 aaKnown RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 SLC18A2Q05940 514 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 MPP3Q13368 585 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 HTR3DQ70Z44 454 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 MARK2Q7KZI7 788 aaKnown RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 TBC1D1Q86TI0 1168 aaPredicted RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 KCNMB4Q86W47 210 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 TMEM25Q86YD3 366 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 ELMOD1Q8N336 334 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 OR6K2Q8NGY2 324 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 PTPRN2Q92932 1015 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 THOC1Q96FV9 657 aaKnown RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 FAM111AQ96PZ2 611 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 PLCD4Q9BRC7 762 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 APOL5Q9BWW9 433 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 FGFR1OP2Q9NVK5 253 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 ZNF358Q9NW07 568 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 CHKBQ9Y259 395 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 SP100P23497 879 aaPredicted RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 NR1H3Q13133 447 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 GPM6BQ13491 265 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 PCID2Q5JVF3 399 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 ATXN7L2Q5T6C5 722 aaPredicted RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 ASTLQ6HA08 431 aaPredicted RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 CHST9Q7L1S5 443 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 STRA8Q7Z7C7 330 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 ITFG1Q8TB96 612 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 PPCSQ9HAB8 311 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 NKIRAS1Q9NYS0 192 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 INTS6Q9UL03 887 aaKnown RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 MTO1Q9Y2Z2 717 aaKnown RBP24.34■■□□□ 1.49
SHISA5-201ENST00000296444 SH3BP1Q9Y3L3 701 aa24.34■■□□□ 1.49
SHISA5-201ENST00000296444 OR51F1A6NGY5 319 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 LUC7L3O95232 432 aaKnown RBP24.33■■□□□ 1.49
SHISA5-201ENST00000296444 TAC1P20366 129 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 GKP32189 559 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 ARSDP51689 593 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 ZNF789Q5FWF6 425 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 SETD3Q86TU7 594 aaPredicted RBP24.33■■□□□ 1.49
SHISA5-201ENST00000296444 VN1R2Q8NFZ6 395 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 ELAC2Q9BQ52 826 aaKnown RBP24.33■■□□□ 1.49
SHISA5-201ENST00000296444 POLR1EQ9GZS1 481 aaKnown RBP24.33■■□□□ 1.49
SHISA5-201ENST00000296444 SUDS3Q9H7L9 328 aaPredicted RBP24.33■■□□□ 1.49
SHISA5-201ENST00000296444 VPS51Q9UID3 782 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 GGT7Q9UJ14 662 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 VPS28Q9UK41 221 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 TCAF1Q9Y4C2 921 aa24.33■■□□□ 1.49
SHISA5-201ENST00000296444 LOC285095A0A1B0GVY8 99 aa24.32■■□□□ 1.48
SHISA5-201ENST00000296444 CTSOP43234 321 aaPredicted RBP24.32■■□□□ 1.48
SHISA5-201ENST00000296444 MPP1Q00013 466 aa24.32■■□□□ 1.48
SHISA5-201ENST00000296444 TNK2Q07912 1038 aa24.32■■□□□ 1.48
SHISA5-201ENST00000296444 CGB2Q6NT52 195 aa24.32■■□□□ 1.48
SHISA5-201ENST00000296444 C16orf46Q6P387 395 aa24.32■■□□□ 1.48
SHISA5-201ENST00000296444 TMC5Q6UXY8 1006 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms