RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CMC1Q7Z7K0 106 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 CRLF3Q8IUI8 442 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 SLC25A41Q8N5S1 370 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 RFWD2Q8NHY2 731 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 KLHL29Q96CT2 875 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 SAMD11Q96NU1 681 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 CYP2S1Q96SQ9 504 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 POLR1EQ9GZS1 481 aaKnown RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 MTIF3Q9H2K0 278 aaKnown RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 RHOJQ9H4E5 214 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 SLC40A1Q9NP59 571 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 DNMT3BQ9UBC3 853 aaKnown RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 OR51B4Q9Y5P0 310 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 MKI67P46013 3256 aaKnown RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 KIF26AQ9ULI4 1882 aaPredicted RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 A0A096LPK6 155 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 LOC285095A0A1B0GVY8 99 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 MOSPD3O75425 235 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 MBL2P11226 248 aaPredicted RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 SERPINH1P50454 418 aaKnown RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 NCALDP61601 193 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 RPS24P62847 133 aaKnown RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 ZNF235Q14590 738 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 SPDYAQ5MJ70 313 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 TXNDC8Q6A555 127 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 ESRP1Q6NXG1 681 aaKnown RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 CFAP52Q8N1V2 620 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 ARL14EPQ8N8R7 260 aaPredicted RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 TSNARE1Q96NA8 513 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 MGME1Q9BQP7 344 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 C17orf80Q9BSJ5 609 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 THAP1Q9NVV9 213 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 ZFP69BQ9UJL9 534 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 TLK1Q9UKI8 766 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 CLASP2O75122 1294 aaKnown RBP9.23□□□□□ -0.93
PDPN-201ENST00000294489 SIN3BO75182 1162 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 UNC5CO95185 931 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 DLDP09622 509 aaKnown RBP9.23□□□□□ -0.93
PDPN-201ENST00000294489 TCF3P15923 654 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 HDCP19113 662 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 GABRR2P28476 465 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 ETFBP38117 255 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 CHRNA4P43681 627 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 SMAD3P84022 425 aaKnown RBP9.23□□□□□ -0.93
PDPN-201ENST00000294489 DSC2Q02487 901 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 ZBTB16Q05516 673 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 CNGA3Q16281 694 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 MPP7Q5T2T1 576 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 KIAA0930Q6ICG6 404 aaPredicted RBP9.23□□□□□ -0.93
PDPN-201ENST00000294489 RAPH1Q70E73 1250 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 CNTN4Q8IWV2 1026 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 SREK1Q8WXA9 508 aaKnown RBP9.23□□□□□ -0.93
PDPN-201ENST00000294489 ALG14Q96F25 216 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 GPR22Q99680 433 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 FAM167BQ9BTA0 163 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 EMCNQ9ULC0 261 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 SLC39A10Q9ULF5 831 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 A0A0D9SEW6 157 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 ZMPSTE24O75844 475 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 PROCP04070 461 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 C2P06681 752 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 HNRNPA1P09651 372 aaKnown RBP eCLIP9.23□□□□□ -0.93
PDPN-201ENST00000294489 POLD2P49005 469 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 CSRP3P50461 194 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 RASSF2P50749 326 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 OCRLQ01968 901 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 TAF1BQ53T94 588 aaPredicted RBP9.23□□□□□ -0.93
PDPN-201ENST00000294489 ZC3HC1Q86WB0 502 aaKnown RBP9.23□□□□□ -0.93
PDPN-201ENST00000294489 ELMOD1Q8N336 334 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 HJURPQ8NCD3 748 aaPredicted RBP9.23□□□□□ -0.93
PDPN-201ENST00000294489 MRPS31Q92665 395 aaKnown RBP9.23□□□□□ -0.93
PDPN-201ENST00000294489 HTATIP2Q9BUP3 242 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 TMEM120AQ9BXJ8 343 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 KCNK4Q9NYG8 393 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 TMEM216Q9P0N5 145 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 COPG2Q9UBF2 871 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 ARHGAP26Q9UNA1 814 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 CPQQ9Y646 472 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 ANKRD36A6QL64 1941 aa9.23□□□□□ -0.93
PDPN-201ENST00000294489 TRAV19A0A0A6YYK7 116 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 MUSKO15146 869 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SNNO75324 88 aaPredicted RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 RASSF9O75901 435 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 EPOP01588 193 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 SYN1P17600 705 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CR2P20023 1033 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 GRK2P25098 689 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 PSMA3P25788 255 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ABCG1P45844 678 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 ARCN1P48444 511 aaKnown RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 ERVK-21P61565 698 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 CYP4F8P98187 520 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 USP10Q14694 798 aaKnown RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 PRSS36Q5K4E3 855 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 PLPP4Q5VZY2 271 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 IL31Q6EBC2 164 aa9.22□□□□□ -0.93
PDPN-201ENST00000294489 TBC1D1Q86TI0 1168 aaPredicted RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 MTDHQ86UE4 582 aaKnown RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 ARID3BQ8IVW6 561 aaPredicted RBP9.22□□□□□ -0.93
PDPN-201ENST00000294489 LEMD2Q8NC56 503 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms