RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 LGI2Q8N0V4 545 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 FAR2Q96K12 515 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 MUS81Q96NY9 551 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 CGRRF1Q99675 332 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 ZBED2Q9BTP6 218 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 SPON1Q9HCB6 807 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 AASSQ9UDR5 926 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 RAP2CQ9Y3L5 183 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 TRAF6Q9Y4K3 522 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 TAF4O00268 1085 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 MICAL2O94851 1124 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 IL4RP24394 825 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 NUMBP49757 651 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 SELENBP1Q13228 472 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 SUPT20HL1Q3ZLR7 823 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 CERCAMQ5T4B2 595 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 PPP2R2DQ66LE6 453 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 SLC41A1Q8IVJ1 513 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 CCDC60Q8IWA6 550 aaPredicted RBP12.94□□□□□ -0.34
HERC6-202ENST00000273960 C4orf19Q8IY42 314 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 LRRC71Q8N4P6 559 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 C7orf31Q8N865 590 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 SLC7A3Q8WY07 619 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 GLMNQ92990 594 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 PTGDR2Q9Y5Y4 395 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 LINC00854A0A1B0GVQ3 168 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 SOBPA7XYQ1 873 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 ASS1P00966 412 aaKnown RBP12.94□□□□□ -0.34
HERC6-202ENST00000273960 PSAPP07602 524 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 INHBBP09529 407 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 TGM2P21980 687 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 SLC7A1P30825 629 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 ARPC4P59998 168 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 PDK2Q15119 407 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 MAPRE1Q15691 268 aaKnown RBP12.94□□□□□ -0.34
HERC6-202ENST00000273960 FAM183BPQ6ZVS7 135 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 CMTR2Q8IYT2 770 aaKnown RBP12.94□□□□□ -0.34
HERC6-202ENST00000273960 TNIP2Q8NFZ5 429 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 DNAJB14Q8TBM8 379 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 PLEKHA5Q9HAU0 1116 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 SPAG4Q9NPE6 437 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 CACNA2D2Q9NY47 1150 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 TUBA8Q9NY65 449 aaPredicted RBP12.94□□□□□ -0.34
HERC6-202ENST00000273960 XPR1Q9UBH6 696 aa12.94□□□□□ -0.34
HERC6-202ENST00000273960 DHRS12A0PJE2 317 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 ANKRD34BA5PLL1 514 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 IL18RAPO95256 599 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 ARPP19P56211 112 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 VPS26BQ4G0F5 336 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 FBXO48Q5FWF7 155 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 FKBP1CQ5VVH2 108 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 ALDH16A1Q8IZ83 802 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 HDAC10Q969S8 669 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 OSBPL10Q9BXB5 764 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 RIC8BQ9NVN3 520 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 MKS1Q9NXB0 559 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 MTMR10Q9NXD2 777 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 USP22Q9UPT9 525 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 SNX9Q9Y5X1 595 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 CLDN25C9JDP6 229 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 AXIN1O15169 862 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 UBDO15205 165 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 LSM8O95777 96 aaKnown RBP12.93□□□□□ -0.34
HERC6-202ENST00000273960 POLBP06746 335 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 IL10P22301 178 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 SERPINB1P30740 379 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 SPRP35270 261 aaPredicted RBP12.93□□□□□ -0.34
HERC6-202ENST00000273960 GRM3Q14832 879 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 GATAD2AQ86YP4 633 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 TRUB1Q8WWH5 349 aaKnown RBP12.93□□□□□ -0.34
HERC6-202ENST00000273960 SPC25Q9HBM1 224 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 TRIM39Q9HCM9 518 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 CHST12Q9NRB3 414 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 DSEQ9UL01 958 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 FASP25445 335 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 TGFBR1P36897 503 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 HSD17B4P51659 736 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 JAK3P52333 1124 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 BCAT1P54687 386 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 STXBP2Q15833 593 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 FAM131BQ86XD5 332 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 CLEC4FQ8N1N0 589 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 SAMD3Q8N6K7 520 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 NIPA2Q8N8Q9 360 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 NDRG1Q92597 394 aaKnown RBP12.93□□□□□ -0.34
HERC6-202ENST00000273960 ST6GALNAC4Q9H4F1 302 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 HOXC10Q9NYD6 342 aa12.93□□□□□ -0.34
HERC6-202ENST00000273960 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.93□□□□□ -0.34
HERC6-202ENST00000273960 RNF103O00237 685 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 DLGAP1O14490 977 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 NADKO95544 446 aaPredicted RBP12.92□□□□□ -0.34
HERC6-202ENST00000273960 GJB1P08034 283 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 GOT1P17174 413 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 CYP3A5P20815 502 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 DCKP27707 260 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 CTBP1Q13363 440 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 EMC2Q15006 297 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 MAMDC4Q6UXC1 1216 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 USP43Q70EL4 1123 aa12.92□□□□□ -0.34
HERC6-202ENST00000273960 KCTD17Q8N5Z5 321 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms