RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 SUN2Q9UH99 717 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 EIF2B4Q9UI10 523 aaKnown RBP10.03□□□□□ -0.8
LRTM1-201ENST00000273286 GGA2Q9UJY4 613 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 SPEGQ15772 3267 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 AKAP13Q12802 2813 aa10.02□□□□□ -0.8
LRTM1-201ENST00000273286 PAEPP09466 180 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 PABPC1P11940 636 aaKnown RBP10.02□□□□□ -0.81
LRTM1-201ENST00000273286 PRKCHP24723 683 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 HLA-FP30511 346 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 PPP1R2P41236 205 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 GIPRP48546 466 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 ST8SIA6P61647 398 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 ADIGQ0VDE8 80 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 CETN1Q12798 172 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 HLA-BQ31612 363 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 DCAF17Q5H9S7 520 aaPredicted RBP10.02□□□□□ -0.81
LRTM1-201ENST00000273286 TMEM215Q68D42 235 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 MSANTD2Q6P1R3 559 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 PAQR3Q6TCH7 311 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 CCNI2Q6ZMN8 369 aaPredicted RBP10.02□□□□□ -0.81
LRTM1-201ENST00000273286 USP30Q70CQ3 517 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 CHST9Q7L1S5 443 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 KIAA0907Q7Z7F0 614 aaPredicted RBP10.02□□□□□ -0.81
LRTM1-201ENST00000273286 C19orf47Q8N9M1 422 aaKnown RBP10.02□□□□□ -0.81
LRTM1-201ENST00000273286 KDM1BQ8NB78 822 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 OR6P1Q8NGX9 317 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 SETD7Q8WTS6 366 aaKnown RBP10.02□□□□□ -0.81
LRTM1-201ENST00000273286 AZIN2Q96A70 460 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 SKA1Q96BD8 255 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 TRIM62Q9BVG3 475 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 METTL14Q9HCE5 456 aaKnown RBP10.02□□□□□ -0.81
LRTM1-201ENST00000273286 DKK4Q9UBT3 224 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 HOOK1Q9UJC3 728 aaKnown RBP10.02□□□□□ -0.81
LRTM1-201ENST00000273286 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.02□□□□□ -0.81
LRTM1-201ENST00000273286 CABIN1Q9Y6J0 2220 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 DMXL2Q8TDJ6 3036 aa10.02□□□□□ -0.81
LRTM1-201ENST00000273286 KNL1Q8NG31 2342 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 O00370 1275 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 PMM2O15305 246 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 PCDHGA12O60330 932 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 RNASEH1O60930 286 aaKnown RBP10.01□□□□□ -0.81
LRTM1-201ENST00000273286 FBXO21O94952 628 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 SMC2O95347 1197 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 SEMA4FO95754 770 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 ASLP04424 464 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 CD19P15391 556 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 POLR2EP19388 210 aaKnown RBP10.01□□□□□ -0.81
LRTM1-201ENST00000273286 CD27P26842 260 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 GRK6P43250 576 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 CORO7P57737 925 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 SLC7A5Q01650 507 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 STIM1Q13586 685 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 ZNF658Q5TYW1 1059 aaPredicted RBP10.01□□□□□ -0.81
LRTM1-201ENST00000273286 ZNF776Q68DI1 518 aaPredicted RBP10.01□□□□□ -0.81
LRTM1-201ENST00000273286 LCLAT1Q6UWP7 414 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 BHLHA9Q7RTU4 235 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 SNX19Q92543 992 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 IGSF8Q969P0 613 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 ERLEC1Q96DZ1 483 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 P2RY11Q96G91 374 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 HSFY1Q96LI6 401 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 PWWP2AQ96N64 755 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 CAMK1GQ96NX5 476 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 ABCB8Q9NUT2 735 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 ARMCX3Q9UH62 379 aaPredicted RBP10.01□□□□□ -0.81
LRTM1-201ENST00000273286 CLEC4EQ9ULY5 219 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 NCKAP1Q9Y2A7 1128 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 FREM2Q5SZK8 3169 aa10.01□□□□□ -0.81
LRTM1-201ENST00000273286 BAHCC1Q9P281 2608 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 YJEFN3A6XGL0 299 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 E7ENQ6 273 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 E9PAM4 449 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 PAPSS1O43252 624 aaPredicted RBP10□□□□□ -0.81
LRTM1-201ENST00000273286 TNFSF14O43557 240 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 IGLV3-27P01718 113 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 CAPNS1P04632 268 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 CDK4P11802 303 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 L1CAMP32004 1257 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 ACSL1P33121 698 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 CCT8P50990 548 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 DAOAP59103 153 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 SCAPQ12770 1279 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 BECN1Q14457 450 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 CBWD6Q4V339 395 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 CBWD3Q5JTY5 395 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 CBWD5Q5RIA9 395 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 PIK3R6Q5UE93 754 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 MBLAC2Q68D91 279 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 ADAT2Q7Z6V5 191 aaKnown RBP10□□□□□ -0.81
LRTM1-201ENST00000273286 ADIPOR2Q86V24 386 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 MFN1Q8IWA4 741 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 ZC3H3Q8IXZ2 948 aaKnown RBP10□□□□□ -0.81
LRTM1-201ENST00000273286 HJURPQ8NCD3 748 aaPredicted RBP10□□□□□ -0.81
LRTM1-201ENST00000273286 SORCS1Q8WY21 1168 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 RELTQ969Z4 430 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 SLC35C1Q96A29 364 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 SERPINB11Q96P15 392 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 MCMBPQ9BTE3 642 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 SFMBT1Q9UHJ3 866 aa10□□□□□ -0.81
LRTM1-201ENST00000273286 EPB41L3Q9Y2J2 1087 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms