RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TMBIM6P55061 237 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 NME5P56597 212 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 ARHGEF6Q15052 776 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 POLD3Q15054 466 aaPredicted RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 DPY19L1Q2PZI1 675 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 PXDC1Q5TGL8 231 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 KIAA0408Q6ZU52 694 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 FRA10AC1Q70Z53 315 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 GATAD2AQ86YP4 633 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 LRRC49Q8IUZ0 686 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 FAM83FQ8NEG4 500 aaPredicted RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 CPB2Q96IY4 423 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 DMRTB1Q96MA1 342 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 SEZ6LQ9BYH1 1024 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 CLPBQ9H078 707 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 ZNF385DQ9H6B1 395 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 PNPLA8Q9NP80 782 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 TLR9Q9NR96 1032 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 ABCB10Q9NRK6 738 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 SEPT9Q9UHD8 586 aaPredicted RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 KLF15Q9UIH9 416 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 PTBP2Q9UKA9 531 aaKnown RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 OAZ3Q9UMX2 235 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 MYO18AQ92614 2054 aaKnown RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 RBBP6Q7Z6E9 1792 aaKnown RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 EI24O14681 340 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 ACOX3O15254 700 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 RFPL2O75678 378 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 EIF2S1P05198 315 aaKnown RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 OXTRP30559 389 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 FMO4P31512 558 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 PSME3P61289 254 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 IRF9Q00978 393 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 PGM5Q15124 567 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 SNRNP35Q16560 246 aaKnown RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 UGCGQ16739 394 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 MTERF2Q49AM1 385 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 CYBRD1Q53TN4 286 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 GJC2Q5T442 439 aaPredicted RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 NXNQ6DKJ4 435 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 SWSAP1Q6NVH7 229 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 ZCCHC8Q6NZY4 707 aaKnown RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 NEK5Q6P3R8 708 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 CYP20A1Q6UW02 462 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 CHCHD4Q8N4Q1 142 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 PSMA8Q8TAA3 256 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 ZNF516Q92618 1163 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 VPS35Q96QK1 796 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 PDCD2LQ9BRP1 358 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 IMPG2Q9BZV3 1241 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 GPN2Q9H9Y4 310 aaPredicted RBP8.85□□□□□ -0.99
VAPB-201ENST00000265619 SEPT3Q9UH03 358 aa8.85□□□□□ -0.99
VAPB-201ENST00000265619 IGLV3-22A0A075B6J6 115 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 WDR64B1ANS9 1081 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 AGRPO00253 132 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 PDHXO00330 501 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 GPC4O75487 556 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 ALOX5P09917 674 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 IL7RP16871 459 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 GARTP22102 1010 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 AXLP30530 894 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 GARSP41250 739 aaKnown RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 NAMPTP43490 491 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 CTF1Q16619 201 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 ZIK1Q3SY52 487 aaPredicted RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 RSBN1Q5VWQ0 802 aaPredicted RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 KRT39Q6A163 491 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 DESI1Q6ICB0 168 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 CRTC3Q6UUV7 619 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 ZNF534Q76KX8 674 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 OTOP1Q7RTM1 612 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 ARMC8Q8IUR7 673 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 ANKFN1Q8N957 763 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 ASCC1Q8N9N2 400 aaKnown RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 FAM20AQ96MK3 541 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 UHRF1Q96T88 793 aaPredicted RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 ACAD9Q9H845 621 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 PRDM8Q9NQV8 689 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 CHRAC1Q9NRG0 131 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 IL37Q9NZH6 218 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 PCSK1NQ9UHG2 260 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 AURKCQ9UQB9 309 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 GINS2Q9Y248 185 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 SPEF1Q9Y4P9 236 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 COPG1Q9Y678 874 aaKnown RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 MAU2Q9Y6X3 613 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 CENPBD1B2RD01 187 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 PHGDHO43175 533 aaKnown RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 GRID2O43424 1007 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 NOL3O60936 208 aaKnown RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 HSPA4LO95757 839 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 MYCP01106 439 aaPredicted RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 APRTP07741 180 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 MBL2P11226 248 aaPredicted RBP8.84□□□□□ -0.99
VAPB-201ENST00000265619 MYL4P12829 197 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 CD40LGP29965 261 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 SLC7A1P30825 629 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 CTAG1AP78358 180 aa8.84□□□□□ -0.99
VAPB-201ENST00000265619 FBXL13Q8NEE6 735 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms