RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 HEBP2Q9Y5Z4 205 aa16.63■□□□□ 0.25
USP13-201ENST00000263966 ZNF185O15231 689 aa16.63■□□□□ 0.25
USP13-201ENST00000263966 CDC40O60508 579 aaKnown RBP eCLIP16.63■□□□□ 0.25
USP13-201ENST00000263966 MNDAP41218 407 aa16.63■□□□□ 0.25
USP13-201ENST00000263966 GIT2Q14161 759 aa16.63■□□□□ 0.25
USP13-201ENST00000263966 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
USP13-201ENST00000263966 HEY2Q9UBP5 337 aa16.63■□□□□ 0.25
USP13-201ENST00000263966 MYH2Q9UKX2 1941 aa16.63■□□□□ 0.25
USP13-201ENST00000263966 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
USP13-201ENST00000263966 SCGB2A1O75556 95 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 CDK7P50613 346 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 RNF43Q68DV7 783 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 AFTPHQ6ULP2 937 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 DHRS1Q96LJ7 313 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 SHOC2Q9UQ13 582 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 PRKAR2AP13861 404 aaKnown RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 C1QBPQ07021 282 aaKnown RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 MARCH10Q8NA82 808 aaPredicted RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 MAPK7Q13164 816 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 HTR3CQ8WXA8 447 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 KLF6Q99612 283 aaPredicted RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 ZYG11BQ9C0D3 744 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 SLC24A3Q9HC58 644 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 RABGEF1Q9UJ41 708 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 ASF1AQ9Y294 204 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 TIMM13Q9Y5L4 95 aaPredicted RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 ADGRB3O60242 1522 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 MAGEA13PA6NCF6 341 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 LOC110117498-PIK3R3F6TDL0 507 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 SRP54P61011 504 aaKnown RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 ABRAXAS1Q6UWZ7 409 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 DHFR2Q86XF0 187 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 LINC00116Q8NCU8 138 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 DCAKDQ8WVC6 231 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 PIK3R3Q92569 461 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 XPR1Q9UBH6 696 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 MANFP55145 182 aaKnown RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 CDH13P55290 713 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 NR1I3Q14994 352 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 FAM153CQ494X1 144 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 APBA2Q99767 749 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 ISCUQ9H1K1 167 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 KIAA1522Q9P206 1035 aaPredicted RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 PTGFRNQ9P2B2 879 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 GPR75-ASB3A0A0A6YYF3 556 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 SH3BGRLO75368 114 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 TRIM3O75382 744 aaPredicted RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 GZMAP12544 262 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 SREBF1P36956 1147 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 RASA2Q15283 850 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 CCDC33Q8N5R6 958 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 RNF145Q96MT1 663 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 MTMR9Q96QG7 549 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 SYNPO2Q9UMS6 1093 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 ERVW-1Q9UQF0 538 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 OR5F1O95221 314 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 UBTFL6P0CB48 400 aaPredicted RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 DCKP27707 260 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 DENND1AQ8TEH3 1009 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 CELF6Q96J87 481 aaKnown RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 EBNA1BP2Q99848 306 aaKnown RBP16.62■□□□□ 0.25
USP13-201ENST00000263966 TAGLN3Q9UI15 199 aa16.62■□□□□ 0.25
USP13-201ENST00000263966 H0YJX3 145 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 GRM6O15303 877 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 ETS1P14921 441 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 PLGLB1Q02325 96 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 SWI5Q1ZZU3 235 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 SEZ6Q53EL9 994 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 MYH1P12882 1939 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 MYH4Q9Y623 1939 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 SMCO3A2RU48 225 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 PEX12O00623 359 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 FOXO4P98177 505 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 ANXA8L1Q5VT79 327 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 LPCAT2Q7L5N7 544 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 MYDGFQ969H8 173 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 PCDHGC3Q9UN70 934 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 CLPTM1O96005 669 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 MAPTP10636 758 aaKnown RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 AGXTP21549 392 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 CCT3P49368 545 aaKnown RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 ELP6Q0PNE2 266 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 CCDC182A6NF36 153 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 CCT8L1PA6NM43 557 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 PIM1P11309 404 aaPredicted RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 ALOX12P18054 663 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 KLHL26Q53HC5 615 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 NUP54Q7Z3B4 507 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 MIEF2Q96C03 454 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 RNF31Q96EP0 1072 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 CRNNQ9UBG3 495 aaPredicted RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 PCDHB3Q9Y5E6 796 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 A0A087X0B3 334 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 LARS2Q15031 903 aaKnown RBP16.61■□□□□ 0.25
USP13-201ENST00000263966 CNSTQ6PJW8 725 aa16.61■□□□□ 0.25
USP13-201ENST00000263966 TIFAQ96CG3 184 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms