RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SCML2Q9UQR0 700 aa14.79□□□□□ -0.04
TRAFD1-201ENST00000257604 UBA6A0AVT1 1052 aaPredicted RBP14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 CCDC160A6NGH7 325 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 ATF6P18850 670 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 CCNCP24863 283 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 HCAR3P49019 387 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 RBM20Q5T481 1227 aaKnown RBP14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 WDR75Q8IWA0 830 aaKnown RBP14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 MFN1Q8IWA4 741 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 FAM126BQ8IXS8 530 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 BEGAINQ9BUH8 593 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 TLR6Q9Y2C9 796 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 ZFP37Q9Y6Q3 630 aaPredicted RBP14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 PDCD11Q14690 1871 aaKnown RBP14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 C2orf78A6NCI8 922 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 PRR5-ARHGAP8B1AHC4 643 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 DHRS4L1P0CG22 281 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 SLC1A2P43004 574 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 ARHGAP8P85298 464 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 HSF5Q4G112 596 aaPredicted RBP14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 ATG14Q6ZNE5 492 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 NPAS4Q8IUM7 802 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 HDAC10Q969S8 669 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 NXNL1Q96CM4 212 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 MRGPRX2Q96LB1 330 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 PANX3Q96QZ0 392 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 TRIM62Q9BVG3 475 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 MUC3BQ9H195 1237 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 WDR55Q9H6Y2 383 aaPredicted RBP14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 NMRAL1Q9HBL8 299 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 BPIFA1Q9NP55 256 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 ARL5AQ9Y689 179 aa14.78□□□□□ -0.04
TRAFD1-201ENST00000257604 MYOCOSA0A1B0GUC4 107 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 F5H5T6 163 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 GABRB3P28472 473 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 CCNFP41002 786 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 PCLAFQ15004 111 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 PDCD2Q16342 344 aaPredicted RBP14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 RALGPS1Q5JS13 557 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 GRTP1Q5TC63 336 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 KCTD11Q693B1 232 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 NAPRTQ6XQN6 538 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 TMEM135Q86UB9 458 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 CEP97Q8IW35 865 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 SNX31Q8N9S9 440 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 OR52K2Q8NGK3 314 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 EIF2B3Q9NR50 452 aaKnown RBP14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 COPG2Q9UBF2 871 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 DCDC2Q9UHG0 476 aa14.77□□□□□ -0.04
TRAFD1-201ENST00000257604 MAGEA13PA6NCF6 341 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 SLC38A8A6NNN8 435 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 FGF10O15520 208 aaPredicted RBP14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 OR6B1O95007 311 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 RPLP2P05387 115 aaKnown RBP14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 LYNP07948 512 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 FAM163BP0C2L3 166 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 GSTT1P30711 240 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 ARRB2P32121 409 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 SERPINB8P50452 374 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 GEMP55040 296 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 FAM26DQ5JW98 314 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 PKN3Q6P5Z2 889 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 ZNF781Q8N8C0 355 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 GATA6Q92908 595 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 NMD3Q96D46 503 aaKnown RBP14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 SSU72Q9NP77 194 aaKnown RBP14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 SOX13Q9UN79 622 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 FAM95CA0A1B0GW59 222 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 ALDH1A2O94788 518 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 PGM3O95394 542 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 ANPEPP15144 967 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 ATP5C1P36542 298 aaKnown RBP14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 NPY2RP49146 381 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 HARS2P49590 506 aaKnown RBP14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 RENBPP51606 427 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 RPS6KA3P51812 740 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 LIMK2P53671 638 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 PCID2Q5JVF3 399 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 LINC00523Q86TU6 105 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 SCUBE1Q8IWY4 988 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 SLAIN1Q8ND83 568 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 SLC26A7Q8TE54 656 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 WBP2Q969T9 261 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 TMEM169Q96HH4 297 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 DNAJC1Q96KC8 554 aaKnown RBP14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 BTN2A3PQ96KV6 586 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 VAT1Q99536 393 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 TMEM39AQ9NV64 488 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 HBS1LQ9Y450 684 aaKnown RBP14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 PCDHGC4Q9Y5F7 938 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 XIRP2A4UGR9 3374 aa14.77□□□□□ -0.05
TRAFD1-201ENST00000257604 GOLGA4Q13439 2230 aaKnown RBP14.76□□□□□ -0.05
TRAFD1-201ENST00000257604 KLHL33A6NCF5 533 aa14.76□□□□□ -0.05
TRAFD1-201ENST00000257604 RTN3O95197 1032 aaPredicted RBP14.76□□□□□ -0.05
TRAFD1-201ENST00000257604 SEC24AO95486 1093 aa14.76□□□□□ -0.05
TRAFD1-201ENST00000257604 HNRNPLP14866 589 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRAFD1-201ENST00000257604 SGSHP51688 502 aa14.76□□□□□ -0.05
TRAFD1-201ENST00000257604 ZRSR2Q15696 482 aaKnown RBP14.76□□□□□ -0.05
TRAFD1-201ENST00000257604 STEAP4Q687X5 459 aa14.76□□□□□ -0.05
TRAFD1-201ENST00000257604 NEPROQ6NW34 567 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms