RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ADAM11O75078 769 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ECDO95905 644 aaPredicted RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 PSAPP07602 524 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 CHRNB2P17787 502 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ITGB8P26012 769 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 CD40LGP29965 261 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 OPRL1P41146 370 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ST13P50502 369 aaKnown RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 RHAGQ02094 409 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 CENPCQ03188 943 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 CALCRLQ16602 461 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 FBXO43Q4G163 708 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 C4orf46Q504U0 113 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 IGSF11Q5DX21 431 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
CCNA1-201ENST00000255465 UBE2UQ5VVX9 321 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 TFAP2DQ7Z6R9 452 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SLFN12Q8IYM2 578 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 C4orf33Q8N1A6 199 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 BEST2Q8NFU1 509 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SH3KBP1Q96B97 665 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 FEM1CQ96JP0 617 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 RIPOR3Q96MK2 946 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ASB2Q96Q27 587 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SPOCK3Q9BQ16 436 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ADNPQ9H2P0 1102 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 SMYD3Q9H7B4 428 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 TMEM206Q9H813 350 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 TIGARQ9NQ88 270 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 ZNF302Q9NR11 478 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 CNTN3Q9P232 1028 aa11.95□□□□□ -0.5
CCNA1-201ENST00000255465 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 MYOCOSA0A1B0GUC4 107 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 PRR5-ARHGAP8B1AHC4 643 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 F8W810 466 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 SPOPO43791 374 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 CDK14O94921 469 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 PLS3P13797 630 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 MYF6P23409 242 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 HOXC8P31273 242 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 SFNP31947 248 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 MAGEA11P43364 429 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 JAK3P52333 1124 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 EPHB1P54762 984 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 MRPS15P82914 257 aaKnown RBP11.94□□□□□ -0.5
CCNA1-201ENST00000255465 ARHGAP8P85298 464 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 FAM160B1Q5W0V3 765 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 PCGF5Q86SE9 256 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 ADGRG5Q8IZF4 528 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 TMEM102Q8N9M5 508 aaPredicted RBP11.94□□□□□ -0.5
CCNA1-201ENST00000255465 OR13F1Q8NGS4 319 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 TCP10LQ8TDR4 215 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 RTKNQ9BST9 563 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 DHRS4Q9BTZ2 278 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 KIFC1Q9BW19 673 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 CD320Q9NPF0 282 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 NXF1Q9UBU9 619 aaKnown RBP11.94□□□□□ -0.5
CCNA1-201ENST00000255465 STOML2Q9UJZ1 356 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 VAV3Q9UKW4 847 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 RIMKLBQ9ULI2 386 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 MAPRE3Q9UPY8 281 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 ZNF175Q9Y473 711 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 TANC1Q9C0D5 1861 aa11.94□□□□□ -0.5
CCNA1-201ENST00000255465 C17orf102A2RUQ5 167 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 A8MU76 341 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 DAB1O75553 588 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 SERPINI2O75830 405 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 CCNKO75909 580 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 OR7A10O76100 309 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 ZNF182P17025 639 aaPredicted RBP11.93□□□□□ -0.5
CCNA1-201ENST00000255465 GAP43P17677 238 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 PIK3R1P27986 724 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 GP5P40197 560 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 ETV4P43268 484 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 SERPINB10P48595 397 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 JAM2P57087 298 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 SSTP61278 116 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 MRPL28Q13084 256 aaKnown RBP11.93□□□□□ -0.5
CCNA1-201ENST00000255465 ZNF211Q13398 564 aaPredicted RBP11.93□□□□□ -0.5
CCNA1-201ENST00000255465 ORC2Q13416 577 aaPredicted RBP11.93□□□□□ -0.5
CCNA1-201ENST00000255465 IKBKEQ14164 716 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 ZNF181Q2M3W8 571 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 PGS1Q32NB8 556 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 YIF1BQ5BJH7 314 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 TEDDM1Q5T9Z0 273 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 ADGRD1Q6QNK2 874 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 BNC2Q6ZN30 1099 aaPredicted RBP11.93□□□□□ -0.5
CCNA1-201ENST00000255465 TMEM26Q6ZUK4 368 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 ZNF767PQ75MW2 155 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 C11orf96Q7Z7L8 435 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 TBC1D21Q8IYX1 336 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 BEND7Q8N7W2 519 aaPredicted RBP11.93□□□□□ -0.5
CCNA1-201ENST00000255465 MFSD2AQ8NA29 543 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 PIK3C3Q8NEB9 887 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 RDM1Q8NG50 284 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 FIG4Q92562 907 aa11.93□□□□□ -0.5
CCNA1-201ENST00000255465 PIK3R3Q92569 461 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms