RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TMC5Q6UXY8 1006 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 ZNF783Q6ZMS7 281 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 FAM47EQ6ZV65 393 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 SH2D5Q6ZV89 423 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 SPATA21Q7Z572 469 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 BANPQ8N9N5 519 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 DENND1AQ8TEH3 1009 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 SPOCK2Q92563 424 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 PIDD1Q9HB75 910 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 ARNT2Q9HBZ2 717 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 IARS2Q9NSE4 1012 aaKnown RBP19.09■□□□□ 0.65
TRIM47-201ENST00000254816 VPS51Q9UID3 782 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 LOC285095A0A1B0GVY8 99 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 CCDC85CA6NKD9 419 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 RASSF9O75901 435 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 TMCC1O94876 653 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 MT-CO1P00395 513 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 PRKCGP05129 697 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 TAC1P20366 129 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 ABCG1P45844 678 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 TEDDM1Q5T9Z0 273 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 LGSNQ5TDP6 509 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 ALG1LQ6GMV1 187 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 ITFG1Q8TB96 612 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 IFT43Q96FT9 208 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 ATXN7L3BQ96GX2 97 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 ZDHHC7Q9NXF8 308 aa19.08■□□□□ 0.65
TRIM47-201ENST00000254816 SMG5Q9UPR3 1016 aaKnown RBP19.08■□□□□ 0.65
TRIM47-201ENST00000254816 FCF1Q9Y324 198 aaKnown RBP19.08■□□□□ 0.65
TRIM47-201ENST00000254816 E2F8A0AVK6 867 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 HGSO14964 777 aaPredicted RBP19.08■□□□□ 0.64
TRIM47-201ENST00000254816 RFPL1O75677 317 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 SERPINF2P08697 491 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 CD70P32970 193 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 LMAN2Q12907 356 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 MSLNQ13421 630 aaPredicted RBP19.08■□□□□ 0.64
TRIM47-201ENST00000254816 RFTN1Q14699 578 aaPredicted RBP19.08■□□□□ 0.64
TRIM47-201ENST00000254816 FYB2Q5VWT5 728 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 PPP2R2DQ66LE6 453 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 TCP10LQ8TDR4 215 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 LINC00597Q9H2U6 94 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 SCUBE2Q9NQ36 999 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 GRID1Q9ULK0 1009 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 SLC12A4Q9UP95 1085 aa19.08■□□□□ 0.64
TRIM47-201ENST00000254816 K7ERQ8 282 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 RFXAPO00287 272 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 UBOX5O94941 541 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 CR2P20023 1033 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 ADRA1DP25100 572 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 SERPINB9P50453 376 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 IL9RQ01113 521 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 CDK18Q07002 472 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 CNGA3Q16281 694 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 STRA8Q7Z7C7 330 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 TMEM25Q86YD3 366 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 CCDC117Q8IWD4 279 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-201ENST00000254816 SMG7Q92540 1137 aaKnown RBP19.07■□□□□ 0.64
TRIM47-201ENST00000254816 THOC1Q96FV9 657 aaKnown RBP19.07■□□□□ 0.64
TRIM47-201ENST00000254816 SGSM3Q96HU1 749 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 KLC4Q9NSK0 619 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 SLC17A7Q9P2U7 560 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 INSIG1O15503 277 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 VAPBO95292 243 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 ASMTLO95671 621 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 PIRTP0C851 137 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 VN1R2Q8NFZ6 395 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 ABHD8Q96I13 439 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 SSU72Q9NP77 194 aaKnown RBP19.07■□□□□ 0.64
TRIM47-201ENST00000254816 TXNDC16Q9P2K2 825 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 CHKBQ9Y259 395 aa19.07■□□□□ 0.64
TRIM47-201ENST00000254816 MRPS23Q9Y3D9 190 aaKnown RBP19.07■□□□□ 0.64
TRIM47-201ENST00000254816 NUP210Q8TEM1 1887 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-201ENST00000254816 ARNTP27540 789 aa19.06■□□□□ 0.64
TRIM47-201ENST00000254816 SLC18A2Q05940 514 aa19.06■□□□□ 0.64
TRIM47-201ENST00000254816 NAB1Q13506 487 aa19.06■□□□□ 0.64
TRIM47-201ENST00000254816 FRG1Q14331 258 aaKnown RBP19.06■□□□□ 0.64
TRIM47-201ENST00000254816 LVRNQ6Q4G3 990 aa19.06■□□□□ 0.64
TRIM47-201ENST00000254816 ARID3BQ8IVW6 561 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-201ENST00000254816 LEMD2Q8NC56 503 aa19.06■□□□□ 0.64
TRIM47-201ENST00000254816 DNAJC8O75937 253 aaPredicted RBP19.05■□□□□ 0.64
TRIM47-201ENST00000254816 ITGA2BP08514 1039 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 DNAJC3Q13217 504 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 ZNF77Q15935 545 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 DUSP6Q16828 381 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 CDHR3Q6ZTQ4 885 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 MTBPQ96DY7 904 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 APOPT1Q96IL0 206 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 FEM1CQ96JP0 617 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 RMDN2Q96LZ7 410 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 CPNE1Q99829 537 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 APOL5Q9BWW9 433 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 SLC13A1Q9BZW2 595 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 TREX1Q9NSU2 369 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 PCMTD2Q9NV79 361 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 LHX3Q9UBR4 397 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 PRKAG3Q9UGI9 489 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 DPP7Q9UHL4 492 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 KCTD3Q9Y597 815 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 PCDHGC4Q9Y5F7 938 aa19.05■□□□□ 0.64
TRIM47-201ENST00000254816 NEDD8-MDP1E9PL57 170 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms