RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 ZMIZ2Q8NF64 920 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 ATP6V1E2Q96A05 226 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 MPP4Q96JB8 637 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 MRPL57Q9BQC6 102 aaKnown RBP18.62■□□□□ 0.57
LRP3-201ENST00000253193 RLFQ13129 1914 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 PSME4Q14997 1843 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 AURKAO14965 403 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 CEACAM7Q14002 265 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 PIWIL4Q7Z3Z4 852 aaKnown RBP18.61■□□□□ 0.57
LRP3-201ENST00000253193 NAT14Q8WUY8 206 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 KATNAL1Q9BW62 490 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 CCDC68Q9H2F9 335 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 ENTPD7Q9NQZ7 604 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 TMEM30AQ9NV96 361 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 THPOP40225 353 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 FSCN1Q16658 493 aaKnown RBP18.61■□□□□ 0.57
LRP3-201ENST00000253193 PITRM1Q5JRX3 1037 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 RAB44Q7Z6P3 723 aaPredicted RBP18.61■□□□□ 0.57
LRP3-201ENST00000253193 MIOSQ9NXC5 875 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 RAD54BQ9Y620 910 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 ARL5CA6NH57 179 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 MS4A2Q01362 244 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 MAPRE2Q15555 327 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 RBM44Q6ZP01 1051 aaKnown RBP18.61■□□□□ 0.57
LRP3-201ENST00000253193 KBTBD6Q86V97 674 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 PGAM4Q8N0Y7 254 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 TLL2Q9Y6L7 1015 aa18.61■□□□□ 0.57
LRP3-201ENST00000253193 GIPC1O14908 333 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 INHBCP55103 352 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 TBC1D25Q3MII6 688 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 FBXO48Q5FWF7 155 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 ZFP1Q6P2D0 407 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 CALML6Q8TD86 181 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 GPR152Q8TDT2 470 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 DSEQ9UL01 958 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 PRG3Q9Y2Y8 225 aaPredicted RBP18.6■□□□□ 0.57
LRP3-201ENST00000253193 RNF103-CHMP3A0A140T963 221 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 MRASO14807 208 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 GRID2O43424 1007 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 PGK1P00558 417 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 HSPA8P11142 646 aaKnown RBP18.6■□□□□ 0.57
LRP3-201ENST00000253193 PSMC3P17980 439 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 NSUN2Q08J23 767 aaKnown RBP eCLIP18.6■□□□□ 0.57
LRP3-201ENST00000253193 TXNDC5Q8NBS9 432 aaKnown RBP18.6■□□□□ 0.57
LRP3-201ENST00000253193 STYXQ8WUJ0 223 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 PKP2Q99959 881 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 NACA2Q9H009 215 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 TCAF1Q9Y4C2 921 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 PTCH2Q9Y6C5 1203 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 NR5A2O00482 541 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 HLA-DQB2P05538 268 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 GABRB3P28472 473 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 CXCR3P49682 368 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 PRKAA2P54646 552 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 EFEMP1Q12805 493 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 TLR1Q15399 786 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 LRRC23Q53EV4 343 aaPredicted RBP18.6■□□□□ 0.57
LRP3-201ENST00000253193 MARC1Q5VT66 337 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 CENPLQ8N0S6 344 aaPredicted RBP18.6■□□□□ 0.57
LRP3-201ENST00000253193 AP4S1Q9Y587 144 aa18.6■□□□□ 0.57
LRP3-201ENST00000253193 DNAJA2O60884 412 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 SRP72O76094 671 aaKnown RBP18.59■□□□□ 0.57
LRP3-201ENST00000253193 FAM58BPP0C7Q3 252 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 GLDCP23378 1020 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 INTS6LQ5JSJ4 861 aaKnown RBP18.59■□□□□ 0.57
LRP3-201ENST00000253193 POTEHQ6S545 545 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 USP50Q70EL3 339 aaPredicted RBP18.59■□□□□ 0.57
LRP3-201ENST00000253193 ADGRG6Q86SQ4 1221 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 CUZD1Q86UP6 607 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 C3orf58Q8NDZ4 430 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 HDAC10Q969S8 669 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 NT5C3BQ969T7 300 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 TSPAN17Q96FV3 270 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 TMEM209Q96SK2 561 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 CCT7Q99832 543 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 SLC39A3Q9BRY0 314 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 KIFC1Q9BW19 673 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 V9GYQ6 96 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 HEATR9A2RTY3 570 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 CRTAMO95727 393 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 PPP1R3AQ16821 1122 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 PHF12Q96QT6 1004 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 SPON2Q9BUD6 331 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 SPC25Q9HBM1 224 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 NDFIP2Q9NV92 336 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 ARHGEF37A1IGU5 675 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 OR51F1A6NGY5 319 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 NCF1BA6NI72 391 aaPredicted RBP18.59■□□□□ 0.57
LRP3-201ENST00000253193 NCF1CA8MVU1 366 aaPredicted RBP18.59■□□□□ 0.57
LRP3-201ENST00000253193 NCF1P14598 390 aaPredicted RBP18.59■□□□□ 0.57
LRP3-201ENST00000253193 NUP93Q8N1F7 819 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 OR9I1Q8NGQ6 314 aa18.59■□□□□ 0.57
LRP3-201ENST00000253193 LTA4HP09960 611 aaKnown RBP18.58■□□□□ 0.57
LRP3-201ENST00000253193 CCNCP24863 283 aa18.58■□□□□ 0.57
LRP3-201ENST00000253193 HCAR3P49019 387 aa18.58■□□□□ 0.57
LRP3-201ENST00000253193 GPR158Q5T848 1215 aa18.58■□□□□ 0.57
LRP3-201ENST00000253193 TIGD7Q6NT04 549 aaPredicted RBP18.58■□□□□ 0.57
LRP3-201ENST00000253193 ZBTB26Q9HCK0 441 aa18.58■□□□□ 0.57
LRP3-201ENST00000253193 RBP1P09455 135 aa18.58■□□□□ 0.56
LRP3-201ENST00000253193 SERPINH1P50454 418 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms