RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 CRHR1P34998 444 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 SPRP35270 261 aaPredicted RBP13.55□□□□□ -0.24
NUP85-201ENST00000245544 LIMK2P53671 638 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 IRX4P78413 519 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 MPP1Q00013 466 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 IFT88Q13099 833 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 CDH18Q13634 790 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 C6orf89Q6UWU4 347 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 SPNS2Q8IVW8 549 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 CACNA2D3Q8IZS8 1091 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 OR13J1Q8NGT2 312 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 LRRC8CQ8TDW0 803 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 GCNAQ96QF7 691 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 LBHD1Q9BQE6 289 aaPredicted RBP13.55□□□□□ -0.24
NUP85-201ENST00000245544 IQCGQ9H095 443 aaKnown RBP13.55□□□□□ -0.24
NUP85-201ENST00000245544 CERS4Q9HA82 394 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 ZNF358Q9NW07 568 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 VPS28Q9UK41 221 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 LSM7Q9UK45 103 aaKnown RBP13.55□□□□□ -0.24
NUP85-201ENST00000245544 CHKBQ9Y259 395 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 HCFC2Q9Y5Z7 792 aa13.55□□□□□ -0.24
NUP85-201ENST00000245544 K7ERQ8 282 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 TMCC1O94876 653 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 RHOP08100 348 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 SERPINF2P08697 491 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 SERPINB4P48594 390 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 ARSDP51689 593 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 GRM3Q14832 879 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 TSTD2Q5T7W7 516 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 CES4AQ5XG92 561 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 MFN1Q8IWA4 741 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 SH3RF2Q8TEC5 729 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
NUP85-201ENST00000245544 IFT43Q96FT9 208 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 TRIB3Q96RU7 358 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 PITPNM3Q9BZ71 974 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 VPS11Q9H270 941 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 SNX15Q9NRS6 342 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 MKS1Q9NXB0 559 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 VPS51Q9UID3 782 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 EMCNQ9ULC0 261 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 PHTF1Q9UMS5 762 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 PCDHGC4Q9Y5F7 938 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 ARL5AQ9Y689 179 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 ANKRD36A6QL64 1941 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 HEATR9A2RTY3 570 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 AURKAO14965 403 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 LDB2O43679 373 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 GSRP00390 522 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 PDHA1P08559 390 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 BMP1P13497 986 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 PTPN2P17706 415 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 BGNP21810 368 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 TYK2P29597 1187 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 EPHA5P54756 1037 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 UBE3AQ05086 875 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 PTPRRQ15256 657 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 ZC3HC1Q86WB0 502 aaKnown RBP13.54□□□□□ -0.24
NUP85-201ENST00000245544 MFSD6LQ8IWD5 586 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 CNTN4Q8IWV2 1026 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 CMTM8Q8IZV2 173 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 CCDC197Q8NCU1 140 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 BLOC1S5Q8TDH9 187 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 VPS39Q96JC1 886 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 FEM1CQ96JP0 617 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 CABS1Q96KC9 395 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 ZSWIM3Q96MP5 696 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 RANBP9Q96S59 729 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 NSRP1Q9H0G5 558 aaKnown RBP13.54□□□□□ -0.24
NUP85-201ENST00000245544 MANSC1Q9H8J5 431 aa13.54□□□□□ -0.24
NUP85-201ENST00000245544 FCF1Q9Y324 198 aaKnown RBP13.54□□□□□ -0.24
NUP85-201ENST00000245544 HELZP42694 1942 aaKnown RBP13.54□□□□□ -0.24
NUP85-201ENST00000245544 MROH6A6NGR9 719 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 INSIG1O15503 277 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 EDF1O60869 148 aaKnown RBP13.53□□□□□ -0.24
NUP85-201ENST00000245544 PRLP01236 227 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 SLC1A2P43004 574 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 MAGEA12P43365 314 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 IRF9Q00978 393 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 RFTN1Q14699 578 aaPredicted RBP13.53□□□□□ -0.24
NUP85-201ENST00000245544 SHHQ15465 462 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 ZNF470Q6ECI4 717 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 KIAA0930Q6ICG6 404 aaPredicted RBP13.53□□□□□ -0.24
NUP85-201ENST00000245544 ADGRD2Q7Z7M1 963 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 PLD6Q8N2A8 252 aaKnown RBP13.53□□□□□ -0.24
NUP85-201ENST00000245544 BBS5Q8N3I7 341 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 ACMSDQ8TDX5 336 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 ARHGAP26Q9UNA1 814 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 RWDD3Q9Y3V2 267 aa13.53□□□□□ -0.24
NUP85-201ENST00000245544 TYW5A2RUC4 315 aaKnown RBP13.52□□□□□ -0.24
NUP85-201ENST00000245544 OR51F1A6NGY5 319 aa13.52□□□□□ -0.24
NUP85-201ENST00000245544 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.24
NUP85-201ENST00000245544 PRAMEF12O95522 483 aa13.52□□□□□ -0.24
NUP85-201ENST00000245544 SAT1P21673 171 aa13.52□□□□□ -0.24
NUP85-201ENST00000245544 CD70P32970 193 aa13.52□□□□□ -0.24
NUP85-201ENST00000245544 AVPR1AP37288 418 aa13.52□□□□□ -0.24
NUP85-201ENST00000245544 PBX2P40425 430 aa13.52□□□□□ -0.24
NUP85-201ENST00000245544 CSE1LP55060 971 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms