RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 PTCH2Q9Y6C5 1203 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 ZSWIM8A7E2V4 1837 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 DICER1Q9UPY3 1922 aaKnown RBP9.23□□□□□ -0.93
SYDE2-201ENST00000234668 IQCA1LA6NCM1 817 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 MATN3O15232 486 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 MTSS1O43312 755 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 CABYRO75952 493 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 OR6B1O95007 311 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 CSPG5O95196 566 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 VCLP18206 1134 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 PBX3P40426 434 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 C1QTNF8P60827 252 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 FLOT2Q14254 428 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 GPR158Q5T848 1215 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 PIK3R6Q5UE93 754 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 TAF2Q6P1X5 1199 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 CYP2R1Q6VVX0 501 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 ACAD11Q709F0 780 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 SPATA24Q86W54 205 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 PDSS2Q86YH6 399 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 KLHDC9Q8NEP7 349 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 ZNF483Q8TF39 744 aaPredicted RBP9.23□□□□□ -0.93
SYDE2-201ENST00000234668 HDAC10Q969S8 669 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 ISL2Q96A47 359 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 ACBD6Q9BR61 282 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 KATNAL1Q9BW62 490 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 SENP6Q9GZR1 1112 aaPredicted RBP9.23□□□□□ -0.93
SYDE2-201ENST00000234668 NOL6Q9H6R4 1146 aaKnown RBP9.23□□□□□ -0.93
SYDE2-201ENST00000234668 CSNK1G1Q9HCP0 422 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 TSR3Q9UJK0 312 aaKnown RBP9.23□□□□□ -0.93
SYDE2-201ENST00000234668 PRRC2BQ5JSZ5 2229 aaKnown RBP9.23□□□□□ -0.93
SYDE2-201ENST00000234668 ERI2A8K979 691 aaKnown RBP9.23□□□□□ -0.93
SYDE2-201ENST00000234668 TARM1B6A8C7 271 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 PEX1O43933 1283 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 THRAP10827 490 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 FGFR3P22607 806 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 CCNCP24863 283 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 OR1G1P47890 313 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 CD151P48509 253 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 GRIK3Q13003 919 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 PTPRRQ15256 657 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 TMEM207Q6UWW9 146 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 FCRL5Q96RD9 977 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 RTKNQ9BST9 563 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 WDR41Q9HAD4 459 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 GPAMQ9HCL2 828 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 DNAJB4Q9UDY4 337 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 SLC45A1Q9Y2W3 748 aa9.23□□□□□ -0.93
SYDE2-201ENST00000234668 TMEM114B3SHH9 223 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 SIX3O95343 332 aaPredicted RBP9.22□□□□□ -0.93
SYDE2-201ENST00000234668 CPB1P15086 417 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 GRIA2P42262 883 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 ALDH1A3P47895 512 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 VASPP50552 380 aaPredicted RBP9.22□□□□□ -0.93
SYDE2-201ENST00000234668 YWHAHQ04917 246 aaPredicted RBP9.22□□□□□ -0.93
SYDE2-201ENST00000234668 PRKAA1Q13131 559 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 MED21Q13503 144 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 LBRQ14739 615 aaKnown RBP9.22□□□□□ -0.93
SYDE2-201ENST00000234668 RAP1GAP2Q684P5 730 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 IYDQ6PHW0 289 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 RANBP10Q6VN20 620 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 LINC00523Q86TU6 105 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 KBTBD6Q86V97 674 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 LILRA2Q8N149 483 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 FAM110BQ8TC76 370 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 BLOC1S5Q8TDH9 187 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 UPF1Q92900 1129 aaKnown RBP eCLIP9.22□□□□□ -0.93
SYDE2-201ENST00000234668 TBATAQ96M53 351 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 VAT1Q99536 393 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 IL12RB2Q99665 862 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 SIKE1Q9BRV8 207 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 STN1Q9H668 368 aaKnown RBP9.22□□□□□ -0.93
SYDE2-201ENST00000234668 TRPC7Q9HCX4 862 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 PAPOLBQ9NRJ5 636 aaKnown RBP9.22□□□□□ -0.93
SYDE2-201ENST00000234668 GMIPQ9P107 970 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 GIT1Q9Y2X7 761 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 NT5C1B-RDH14C9J2C7 533 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 TRPA1O75762 1119 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 ANXA9O76027 345 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 SUPT7LO94864 414 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 ASGR1P07306 291 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 AKR1A1P14550 325 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 ACVRL1P37023 503 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 CDKN2DP55273 166 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 COG7P83436 770 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 TSPY1Q01534 308 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 FOLH1Q04609 750 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 GALNT3Q14435 633 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 AGKQ53H12 422 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 SMYD5Q6GMV2 418 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 IGSF8Q969P0 613 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 EXOC2Q96KP1 924 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 KLHL32Q96NJ5 620 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 MTG1Q9BT17 334 aaPredicted RBP9.22□□□□□ -0.93
SYDE2-201ENST00000234668 MRPL46Q9H2W6 279 aaKnown RBP9.22□□□□□ -0.93
SYDE2-201ENST00000234668 NCKIPSDQ9NZQ3 722 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 APPL1Q9UKG1 709 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 DSEQ9UL01 958 aa9.22□□□□□ -0.93
SYDE2-201ENST00000234668 A0A1B0GTW7 788 aa9.21□□□□□ -0.93
SYDE2-201ENST00000234668 TCAF2A6NFQ2 919 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms