RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ZNF214Q9UL59 606 aaPredicted RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 CITO14578 2027 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 SOBPA7XYQ1 873 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 TMEM114B3SHH9 223 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 MAFO75444 373 aaPredicted RBP14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 PLCL1Q15111 1095 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 PPP1R3AQ16821 1122 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 GRTP1Q5TC63 336 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 FAAH2Q6GMR7 532 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 SAMD7Q7Z3H4 446 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 KCNMB4Q86W47 210 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 TMEM102Q8N9M5 508 aaPredicted RBP14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 HTRA1Q92743 480 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 QKIQ96PU8 341 aaKnown RBP eCLIP14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 SMARCAD1Q9H4L7 1026 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 TRPV5Q9NQA5 729 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 RAP2CQ9Y3L5 183 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 UNCXA6NJT0 531 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 GRID2O43424 1007 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 B4GALT4O60513 344 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 BCAS2O75934 225 aaPredicted RBP14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 FAM209AQ5JX71 171 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 FAM160B1Q5W0V3 765 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 KCTD8Q6ZWB6 473 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 COPS5Q92905 334 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 C1orf50Q9BV19 199 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 TEX13BQ9BXU2 312 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 CHST12Q9NRB3 414 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 SEPT3Q9UH03 358 aa14.29□□□□□ -0.12
PCDHB3-201ENST00000231130 ZBTB7AO95365 584 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 TMEM132DQ14C87 1099 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 NDUFA5Q16718 116 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 IER5Q5VY09 327 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 TRPC4APQ8TEL6 797 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 EXT2Q93063 718 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 PHF21BQ96EK2 531 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 BEGAINQ9BUH8 593 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 EPS8L2Q9H6S3 715 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 MORF4L1Q9UBU8 362 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 AKT3Q9Y243 479 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 A0A087WZ62 844 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 PRSS51A0A1B0GVH4 220 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 SULT1C4O75897 302 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 ALDH1A2O94788 518 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 VTNP04004 478 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 SERPINB1P30740 379 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 SULT1E1P49888 294 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 GEN1Q17RS7 908 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 KIZQ2M2Z5 673 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 TREML2Q5T2D2 321 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 DSG4Q86SJ6 1040 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 FSTL5Q8N475 847 aaPredicted RBP14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 SUN5Q8TC36 379 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 CANT1Q8WVQ1 401 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 KHSRPQ92945 711 aaKnown RBP eCLIP14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 FAR2Q96K12 515 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 FDXACB1Q9BRP7 624 aaPredicted RBP14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 PIF1Q9H611 641 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 DDX28Q9NUL7 540 aaKnown RBP14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 OXSMQ9NWU1 459 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 HACD3Q9P035 362 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 TBC1D14Q9P2M4 693 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 TCAF2A6NFQ2 919 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 ACKR2O00590 384 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 HTRA2O43464 458 aaPredicted RBP14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 FARP2O94887 1054 aaPredicted RBP14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 MFN2O95140 757 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 LIMK2P53671 638 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 BACE1P56817 501 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 INSCQ1MX18 579 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 XRRA1Q6P2D8 792 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 NT5DC4Q86YG4 428 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 SEPT1Q8WYJ6 367 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 NXNL1Q96CM4 212 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 EFHD1Q9BUP0 239 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 LRRC40Q9H9A6 602 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 DPP3Q9NY33 737 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 CPQQ9Y646 472 aa14.28□□□□□ -0.12
PCDHB3-201ENST00000231130 SOCS2O14508 198 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 CLOCKO15516 846 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 NMBRP28336 390 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 TUBA4AP68366 448 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 LCLAT1Q6UWP7 414 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 PIWIL3Q7Z3Z3 882 aaKnown RBP14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 DENND6AQ8IWF6 608 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 OTUD5Q96G74 571 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 SLC45A3Q96JT2 553 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 TP63Q9H3D4 680 aaPredicted RBP14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 ATXN3LQ9H3M9 355 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 ZBTB26Q9HCK0 441 aa14.27□□□□□ -0.12
PCDHB3-201ENST00000231130 PRORSD1PA6NEY8 169 aa14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 TRIM38O00635 465 aa14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 NFATC3Q12968 1075 aa14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 TRIM25Q14258 630 aaKnown RBP14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 USP43Q70EL4 1123 aa14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 DEFB106AQ8N104 65 aa14.27□□□□□ -0.13
PCDHB3-201ENST00000231130 CBR4Q8N4T8 237 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms