RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 DRC3Q9H069 523 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 SSX2IPQ9Y2D8 614 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 RAP2CQ9Y3L5 183 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 TCAF1Q9Y4C2 921 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 DOCK4Q8N1I0 1966 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 ENPP3O14638 875 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 PEX1O43933 1283 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 NBNO60934 754 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 ZMPSTE24O75844 475 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 CHRM1P11229 460 aaPredicted RBP22.42■■□□□ 1.18
CCDC9-201ENST00000221922 COL6A2P12110 1019 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 BFSP2Q13515 415 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 USP10Q14694 798 aaKnown RBP22.42■■□□□ 1.18
CCDC9-201ENST00000221922 POU6F1Q14863 301 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 DDR2Q16832 855 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 LPCAT4Q643R3 524 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 ZNF280DQ6N043 979 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 SLC39A13Q96H72 371 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 MYLKQ15746 1914 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 MIA3Q5JRA6 1907 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 GOLGA8TH3BQL2 631 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 THRAP10827 490 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 UQCRBP14927 111 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 ROR2Q01974 943 aaKnown RBP22.42■■□□□ 1.18
CCDC9-201ENST00000221922 TCHHL1Q5QJ38 904 aaPredicted RBP22.42■■□□□ 1.18
CCDC9-201ENST00000221922 FATE1Q969F0 183 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 ZNF419Q96HQ0 510 aaPredicted RBP22.42■■□□□ 1.18
CCDC9-201ENST00000221922 ACE2Q9BYF1 805 aaPredicted RBP22.42■■□□□ 1.18
CCDC9-201ENST00000221922 PRKD2Q9BZL6 878 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 UBE2OQ9C0C9 1292 aaKnown RBP22.42■■□□□ 1.18
CCDC9-201ENST00000221922 NDFIP2Q9NV92 336 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 IPO11Q9UI26 975 aaKnown RBP22.42■■□□□ 1.18
CCDC9-201ENST00000221922 NUDT5Q9UKK9 219 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 PCDHB7Q9Y5E2 793 aa22.42■■□□□ 1.18
CCDC9-201ENST00000221922 FAM92AA1XBS5 289 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 SLC22A2O15244 555 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 HDAC3O15379 428 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 RAG1P15918 1043 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 PEX2P28328 305 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 GRK4P32298 578 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 GPR15P49685 360 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 SLC12A1Q13621 1099 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 GPNMBQ14956 572 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 FAM171A1Q5VUB5 890 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 SDHAF4Q5VUM1 108 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 LIPMQ5VYY2 423 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 C14orf80Q86SX3 495 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 MFN1Q8IWA4 741 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 CASD1Q96PB1 797 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 SH3GL3Q99963 347 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 TASP1Q9H6P5 420 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 MPP6Q9NZW5 540 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 PRPF19Q9UMS4 504 aaKnown RBP22.41■■□□□ 1.18
CCDC9-201ENST00000221922 TBC1D30Q9Y2I9 924 aa22.41■■□□□ 1.18
CCDC9-201ENST00000221922 CHRNGP07510 517 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 SBK3P0C264 359 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 FGFR3P22607 806 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 CALRP27797 417 aaKnown RBP22.4■■□□□ 1.18
CCDC9-201ENST00000221922 RPL14P50914 215 aaKnown RBP22.4■■□□□ 1.18
CCDC9-201ENST00000221922 NDST2P52849 883 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 TBX4P57082 545 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 CWF19L1Q69YN2 538 aaKnown RBP22.4■■□□□ 1.18
CCDC9-201ENST00000221922 UMODL1-AS1Q8N2C9 162 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 CPSF7Q8N684 471 aaKnown RBP22.4■■□□□ 1.18
CCDC9-201ENST00000221922 DBF4BQ8NFT6 615 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 CPSF2Q9P2I0 782 aaKnown RBP22.4■■□□□ 1.18
CCDC9-201ENST00000221922 CCDC78A2IDD5 438 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 RGSL1A5PLK6 1076 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 PMPCBO75439 489 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 VAPBO95292 243 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 RHOQP17081 205 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 MPSTP25325 297 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 PIK3R1P27986 724 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 MED21Q13503 144 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 LRRC36Q1X8D7 754 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 PIK3R6Q5UE93 754 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 KIAA0930Q6ICG6 404 aaPredicted RBP22.4■■□□□ 1.18
CCDC9-201ENST00000221922 RANBP10Q6VN20 620 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 FAM126BQ8IXS8 530 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 EFCAB3Q8N7B9 438 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 SLC25A51Q9H1U9 297 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 STK39Q9UEW8 545 aa22.4■■□□□ 1.18
CCDC9-201ENST00000221922 AHSGP02765 367 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 ARCN1P48444 511 aaKnown RBP22.39■■□□□ 1.17
CCDC9-201ENST00000221922 RENBPP51606 427 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 AQP4P55087 323 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 USP46P62068 366 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 GRM2Q14416 872 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 C11orf91Q3C1V1 193 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 SEL1L3Q68CR1 1132 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 ESRP1Q6NXG1 681 aaKnown RBP22.39■■□□□ 1.17
CCDC9-201ENST00000221922 MRGPRX2Q96LB1 330 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 GPR62Q9BZJ7 368 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 ZNF385DQ9H6B1 395 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 MARCH5Q9NX47 278 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 GMIPQ9P107 970 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 CEP350Q5VT06 3117 aa22.39■■□□□ 1.17
CCDC9-201ENST00000221922 VCLP18206 1134 aa22.38■■□□□ 1.17
CCDC9-201ENST00000221922 ADSLP30566 484 aaPredicted RBP22.38■■□□□ 1.17
CCDC9-201ENST00000221922 GRIA4P48058 902 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms