RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 PTK2BQ14289 1009 aa16■□□□□ 0.15
SNAPC1-201ENST00000216294 RARS2Q5T160 578 aaKnown RBP16■□□□□ 0.15
SNAPC1-201ENST00000216294 MAP3K21Q5TCX8 1036 aa16■□□□□ 0.15
SNAPC1-201ENST00000216294 TAF2Q6P1X5 1199 aa16■□□□□ 0.15
SNAPC1-201ENST00000216294 RP9Q8TA86 221 aaKnown RBP16■□□□□ 0.15
SNAPC1-201ENST00000216294 HASPINQ8TF76 798 aa16■□□□□ 0.15
SNAPC1-201ENST00000216294 PDCD6IPQ8WUM4 868 aaKnown RBP16■□□□□ 0.15
SNAPC1-201ENST00000216294 EXT2Q93063 718 aa16■□□□□ 0.15
SNAPC1-201ENST00000216294 GPR78Q96P69 363 aa16■□□□□ 0.15
SNAPC1-201ENST00000216294 FAM124BQ9H5Z6 455 aaPredicted RBP16■□□□□ 0.15
SNAPC1-201ENST00000216294 COQ10BQ9H8M1 238 aa16■□□□□ 0.15
SNAPC1-201ENST00000216294 HSFX1Q9UBD0 423 aa16■□□□□ 0.15
SNAPC1-201ENST00000216294 COMMD3-BMI1R4GMX3 469 aa16■□□□□ 0.15
SNAPC1-201ENST00000216294 SDHDO14521 159 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 DDHD2O94830 711 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 ETFBP38117 255 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 FCGRTP55899 365 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 USP46P62068 366 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 MFSD14CQ5VZR4 134 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 ARHGAP18Q8N392 663 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 MARVELD2Q8N4S9 558 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 C3orf58Q8NDZ4 430 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 DIS3LQ8TF46 1054 aaKnown RBP15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 STYXQ8WUJ0 223 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 HIC2Q96JB3 615 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 ZNF560Q96MR9 790 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 HNRNPABQ99729 332 aaKnown RBP15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 CIB1Q99828 191 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 COLEC11Q9BWP8 271 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 ZNF385DQ9H6B1 395 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 WDCPQ9H6R7 721 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 PRDM16Q9HAZ2 1276 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 VCX3AQ9NNX9 186 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 TARM1B6A8C7 271 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 PPP6CO00743 305 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 ACOT8O14734 319 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 MSI1O43347 362 aaKnown RBP15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 CKMT2P17540 419 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 DAOAP59103 153 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 SEMA3BQ13214 749 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 MTX3Q5HYI7 312 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 ZNF470Q6ECI4 717 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 BNIPLQ7Z465 357 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 EME1Q96AY2 570 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 TEKT5Q96M29 485 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 MRPL1Q9BYD6 325 aaKnown RBP15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 FAM96AQ9H5X1 160 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 PREBQ9HCU5 417 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 C6orf203Q9P0P8 240 aaPredicted RBP15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 FBXW11Q9UKB1 542 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 ST3GAL5Q9UNP4 418 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 ACOT9Q9Y305 439 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 SNX13Q9Y5W8 968 aa15.99■□□□□ 0.15
SNAPC1-201ENST00000216294 M0QZ92 97 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 FBP2O00757 339 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 TRIM67Q6ZTA4 783 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 TMEM102Q8N9M5 508 aaPredicted RBP15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 SCAMP5Q8TAC9 235 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 TNIP3Q96KP6 325 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 TSNARE1Q96NA8 513 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 SLC2A13Q96QE2 648 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 SERPINI1Q99574 410 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 SENP6Q9GZR1 1112 aaPredicted RBP15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 RCOR3Q9P2K3 495 aaPredicted RBP15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 TRPV2Q9Y5S1 764 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 DENRO43583 198 aaKnown RBP15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 TOMM70O94826 608 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 FAM200BP0CF97 657 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 PRDX6P30041 224 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 TM4SF4P48230 202 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 CDH17Q12864 832 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 PRKAA1Q13131 559 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 MGAT5BQ3V5L5 792 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 AGKQ53H12 422 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 METTL21CQ5VZV1 264 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 CPNE9Q8IYJ1 553 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 PGAM4Q8N0Y7 254 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 BTBD9Q96Q07 612 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 OLFM1Q99784 485 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 TRPV6Q9H1D0 765 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 RHOJQ9H4E5 214 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 NOL11Q9H8H0 719 aaKnown RBP15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 EFCAB1Q9HAE3 211 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 GDAP2Q9NXN4 497 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 RNF11Q9Y3C5 154 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 PCDHGA7Q9Y5G6 932 aa15.98■□□□□ 0.15
SNAPC1-201ENST00000216294 FAM149AA5PLN7 773 aa15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 PRORSD1PA6NEY8 169 aa15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 XPOTO43592 962 aaKnown RBP15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 MOCS2O96007 188 aaPredicted RBP15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 CHRNA1P02708 482 aa15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 MAXP61244 160 aa15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 PSME3P61289 254 aa15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 DYNC1I2Q13409 638 aaKnown RBP15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 SLC12A1Q13621 1099 aa15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 TICAM1Q8IUC6 712 aa15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 SREK1Q8WXA9 508 aaKnown RBP15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 CNDP1Q96KN2 507 aa15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 IL22Q9GZX6 179 aa15.97■□□□□ 0.15
SNAPC1-201ENST00000216294 MPP6Q9NZW5 540 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms