RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 ANXA9O76027 345 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 NFKB1P19838 968 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 XPAP23025 273 aaPredicted RBP20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 OXTRP30559 389 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 COILP38432 576 aaPredicted RBP20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 CD86P42081 329 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 DNTTIP2Q5QJE6 756 aaKnown RBP20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 BRAT1Q6PJG6 821 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 CCDC110Q8TBZ0 833 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 IMP4Q96G21 291 aaKnown RBP20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 KLHL32Q96NJ5 620 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 FCRL5Q96RD9 977 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 TPSD1Q9BZJ3 242 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 FBXL12Q9NXK8 326 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 SARDHQ9UL12 918 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 FZD4Q9ULV1 537 aa20.4■□□□□ 0.86
RHBDD3-201ENST00000216085 RNASEH2AO75792 299 aaKnown RBP20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 PIGNO95427 931 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 PXNP49023 591 aaPredicted RBP20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 GDF10P55107 478 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 POLR2LP62875 67 aaKnown RBP20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 POM121L1PQ3SYA9 428 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 FBXL19Q6PCT2 694 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 WDR5BQ86VZ2 330 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 CAMK1DQ8IU85 385 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 NDUFAF2Q8N183 169 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 HDDC3Q8N4P3 179 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 ARRDC2Q8TBH0 407 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 PDCD6IPQ8WUM4 868 aaKnown RBP20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 HDAC8Q9BY41 377 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 PAK5Q9P286 719 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 DKK3Q9UBP4 350 aa20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 AAR2Q9Y312 384 aaKnown RBP20.39■□□□□ 0.86
RHBDD3-201ENST00000216085 A0A1W2PP55 124 aa20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 SLC7A4O43246 635 aa20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 KCNJ1P48048 391 aa20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 TPMTP51580 245 aa20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 NEK3P51956 506 aa20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 ARMC12Q5T9G4 340 aa20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 ERN2Q76MJ5 926 aaKnown RBP20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 MAML2Q8IZL2 1156 aaPredicted RBP20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 ITM2CQ9NQX7 267 aa20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 USP36Q9P275 1121 aaKnown RBP20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 FAM153AQ9UHL3 310 aa20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 RAI2Q9Y5P3 530 aa20.39■□□□□ 0.85
RHBDD3-201ENST00000216085 TTC24A2A3L6 582 aaPredicted RBP20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 ECEL1O95672 775 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 TDGF1P13385 188 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 SUOXP51687 545 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 GEMP55040 296 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 NIPAL4Q0D2K0 466 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 MPP3Q13368 585 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 PARP6Q2NL67 630 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 C11orf74Q86VG3 221 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 MNS1Q8NEH6 495 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 RAB7BQ96AH8 199 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 IFT43Q96FT9 208 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 RBM15Q96T37 977 aaKnown RBP eCLIP20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 ARIH1Q9Y4X5 557 aaPredicted RBP20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 PCDHGC4Q9Y5F7 938 aa20.38■□□□□ 0.85
RHBDD3-201ENST00000216085 GJB3O75712 270 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 CD68P34810 354 aaPredicted RBP20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 FNTBP49356 437 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 CCDC70Q6NSX1 233 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 CCHCR1Q8TD31 782 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 FSD1LQ9BXM9 530 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 TDRD1Q9BXT4 1180 aaKnown RBP20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 ADGRE3Q9BY15 652 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 BTBD1Q9H0C5 482 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 DDX47Q9H0S4 455 aaKnown RBP20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 PCDH9Q9HC56 1237 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 ZSCAN32Q9NX65 697 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 CYP8B1Q9UNU6 501 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 MRFAP1Q9Y605 127 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 ZNF318Q5VUA4 2279 aa20.37■□□□□ 0.85
RHBDD3-201ENST00000216085 C16orf96A6NNT2 1141 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 PDE2AO00408 941 aaPredicted RBP20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 CPP00450 1065 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 IGLV3-19P01714 112 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 SP9P0CG40 484 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 PSMB4P28070 264 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 CNR2P34972 360 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 FDFT1P37268 417 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 EPHB1P54762 984 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 SKOR1P84550 965 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 CNTN1Q12860 1018 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 PPP1R7Q15435 360 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 TTC27Q6P3X3 843 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 ZC3H14Q6PJT7 736 aaKnown RBP20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 PARS2Q7L3T8 475 aaKnown RBP20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 KLHL7Q8IXQ5 586 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 AADATQ8N5Z0 425 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 SPATA4Q8NEY3 305 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 ARRDC3Q96B67 414 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 SGK2Q9HBY8 427 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 PCDHB9Q9Y5E1 797 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 TSPAN11A1L157 253 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 E7EVH7 732 aa20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 HTRA2O43464 458 aaPredicted RBP20.36■□□□□ 0.85
RHBDD3-201ENST00000216085 ADRB3P13945 408 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms