RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 MAGP20916 626 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 NR2C2P49116 596 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 ECT2LQ008S8 904 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 CYP51A1Q16850 503 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 SETD3Q86TU7 594 aaPredicted RBP16.9■□□□□ 0.3
CTDP1-201ENST00000075430 NPWQ8N729 165 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 FNDC8Q8TC99 324 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 FZD8Q9H461 694 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 USP22Q9UPT9 525 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 SH3GLB1Q9Y371 365 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 MICAL3Q7RTP6 2002 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 H3BMM5 538 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 HUS1O60921 280 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 SIX3O95343 332 aaPredicted RBP16.9■□□□□ 0.3
CTDP1-201ENST00000075430 PGK1P00558 417 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 USP17L7P0C7H9 530 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 MAXP61244 160 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 SLC16A10Q8TF71 515 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 VPS33AQ96AX1 596 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 ING2Q9H160 280 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
CTDP1-201ENST00000075430 LTB4R2Q9NPC1 389 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 SETD4Q9NVD3 440 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 NCKIPSDQ9NZQ3 722 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 TNFSF13BQ9Y275 285 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 PCDHGA7Q9Y5G6 932 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.9■□□□□ 0.3
CTDP1-201ENST00000075430 SDHDO14521 159 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 EI24O14681 340 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 HBP1O60381 514 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 CRCPO75575 148 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 PIRTP0C851 137 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 COL6A2P12110 1019 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 ATP6V1B2P21281 511 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 GABRB3P28472 473 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 TKTP29401 623 aaKnown RBP16.89■□□□□ 0.29
CTDP1-201ENST00000075430 CTBSQ01459 385 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 PMS2P3Q13401 168 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 AARS2Q5JTZ9 985 aaKnown RBP16.89■□□□□ 0.29
CTDP1-201ENST00000075430 SHCBP1Q8NEM2 672 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 APBB2Q92870 758 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 OSMRQ99650 979 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 RHOBTB2Q9BYZ6 727 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 OSBPL6Q9BZF3 934 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 CYP3A43Q9HB55 503 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 TIMMDC1Q9NPL8 285 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 PNPLA3Q9NST1 481 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 ERAP1Q9NZ08 941 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 MAGED1Q9Y5V3 778 aaPredicted RBP16.89■□□□□ 0.29
CTDP1-201ENST00000075430 RBBP6Q7Z6E9 1792 aaKnown RBP16.89■□□□□ 0.29
CTDP1-201ENST00000075430 TRIM43BA6NCK2 446 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 OR51F1A6NGY5 319 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 ALDH1A2O94788 518 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 SLC35E2BP0CK96 405 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 IMPDH2P12268 514 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 APLP1P51693 650 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 KCNA7Q96RP8 456 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 FSD1LQ9BXM9 530 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 PRMT7Q9NVM4 692 aaPredicted RBP16.89■□□□□ 0.29
CTDP1-201ENST00000075430 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.89■□□□□ 0.29
CTDP1-201ENST00000075430 SCN1AP35498 2009 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 QSER1Q2KHR3 1735 aa16.89■□□□□ 0.29
CTDP1-201ENST00000075430 PTGES3LE9PB15 166 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 H3BNH8 94 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 ACOT8O14734 319 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 EIF2B2P49770 351 aaKnown RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 TKTL1P51854 596 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 STX5Q13190 355 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 IMPG1Q17R60 797 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 INSCQ1MX18 579 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 HMBOX1Q6NT76 420 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 ERI1Q8IV48 349 aaKnown RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 CENPLQ8N0S6 344 aaPredicted RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 DDHD1Q8NEL9 900 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 NUDT8Q8WV74 236 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 ZFYVE28Q9HCC9 887 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 CACNA2D2Q9NY47 1150 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 LAMA3Q16787 3333 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 PRRC2BQ5JSZ5 2229 aaKnown RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 SPTLC1O15269 473 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 MPOP05164 745 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 GHRHRQ02643 423 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 ZYG11AQ6WRX3 759 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 PRR23BQ6ZRT6 265 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 IFNLR1Q8IU57 520 aaPredicted RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 CHERPQ8IWX8 916 aaKnown RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 TUBGCP3Q96CW5 907 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 MLPHQ9BV36 600 aaPredicted RBP16.88■□□□□ 0.29
CTDP1-201ENST00000075430 OSBPL11Q9BXB4 747 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 MUC3BQ9H195 1237 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 SPAG4Q9NPE6 437 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 PTPRFP10586 1907 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 A8MU76 341 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 ZBTB42B2RXF5 422 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 K7EPI3 171 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 SBK3P0C264 359 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 BDNFP23560 247 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 METTL21CQ5VZV1 264 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 EGFLAMQ63HQ2 1017 aa16.88■□□□□ 0.29
CTDP1-201ENST00000075430 TMEM214Q6NUQ4 689 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms