RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 TBX18O95935 607 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 HOXD8P13378 290 aaPredicted RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 ADAM17P78536 824 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 COG7P83436 770 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 RBBP5Q15291 538 aaKnown RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 UGP2Q16851 508 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 RARS2Q5T160 578 aaKnown RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 USP50Q70EL3 339 aaPredicted RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 ZNF467Q7Z7K2 595 aaPredicted RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 ANKRD49Q8WVL7 239 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 KLHL32Q96NJ5 620 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 VAT1Q99536 393 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 DMAP1Q9NPF5 467 aaPredicted RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 TSR3Q9UJK0 312 aaKnown RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 DSEQ9UL01 958 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 PRG3Q9Y2Y8 225 aaPredicted RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 TCAF1Q9Y4C2 921 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 TCAF2A6NFQ2 919 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 LRRC14BA6NHZ5 514 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 J3KR12 359 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 SDHDO14521 159 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 ANXA9O76027 345 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 C1QTNF8P60827 252 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 DSC2Q02487 901 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 OVOS1Q6IE37 1185 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 ADGRG6Q86SQ4 1221 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 METTL23Q86XA0 190 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 ISL2Q96A47 359 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 DNAJC1Q96KC8 554 aaKnown RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 PARK7Q99497 189 aaKnown RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 SPATA16Q9BXB7 569 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 OSBPL2Q9H1P3 480 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 SLC38A7Q9NVC3 462 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 PPP6CO00743 305 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 MAFKO60675 156 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 APOA4P06727 396 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 CCR1P32246 355 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 GPR15P49685 360 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 CHN2P52757 468 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 DDR2Q16832 855 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 ZNF423Q2M1K9 1284 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 FAM83EQ2M2I3 478 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 EME1Q96AY2 570 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 TRAPPC9Q96Q05 1148 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 SOAT2O75908 522 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 CRTAMO95727 393 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 ZNF865P0CJ78 1059 aaPredicted RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 THPOP40225 353 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 ARSDP51689 593 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 SLC5A3P53794 718 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 PSME3P61289 254 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 SLC10A7Q0GE19 358 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 GPR158Q5T848 1215 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 MAP3K21Q5TCX8 1036 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 IL23RQ5VWK5 629 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 CEP70Q8NHQ1 597 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 PDCD6IPQ8WUM4 868 aaKnown RBP8.36□□□□□ -1.07
CDC27-201ENST00000066544 GPR78Q96P69 363 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 SNX13Q9Y5W8 968 aa8.36□□□□□ -1.07
CDC27-201ENST00000066544 IRAK2O43187 625 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 RNASEH2AO75792 299 aaKnown RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 CNTN5O94779 1100 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 SNUPNO95149 360 aaKnown RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 HAPLN1P10915 354 aaPredicted RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 ARCN1P48444 511 aaKnown RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 PRAMEP78395 509 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 CDKL1Q00532 357 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 SULT2A1Q06520 285 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 FAM110CQ1W6H9 321 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 SMYD5Q6GMV2 418 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 HDAC10Q969S8 669 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 MRGPRX2Q96LB1 330 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 MRPL1Q9BYD6 325 aaKnown RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 ZBTB26Q9HCK0 441 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 SIX3O95343 332 aaPredicted RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 KCNC1P48547 511 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 HCAR3P49019 387 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 CPT1AP50416 773 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 MRPS6P82932 125 aaKnown RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 FASTKQ14296 549 aaKnown RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 PIGGQ5H8A4 983 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 PM20D1Q6GTS8 502 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 BLOC1S5Q8TDH9 187 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 DIS3LQ8TF46 1054 aaKnown RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 PTCH2Q9Y6C5 1203 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 SBF1O95248 1867 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 A0A1W2PQH9 124 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 SPATA31D3P0C874 917 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 ATP5F1P24539 256 aaPredicted RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 GEMP55040 296 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 SATB1Q01826 763 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 EFEMP1Q12805 493 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 SPATA31D4Q6ZUB0 917 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 CUZD1Q86UP6 607 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 IFNEQ86WN2 208 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 SPATA2LQ8IUW3 424 aaPredicted RBP8.35□□□□□ -1.07
CDC27-201ENST00000066544 TMEM86AQ8N2M4 240 aa8.35□□□□□ -1.07
CDC27-201ENST00000066544 DDX18Q9NVP1 670 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms