RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 M0R2N6 131 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ATP6V0D1P61421 351 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 GNA13Q14344 377 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ITIH4Q14624 930 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 TEAD4Q15561 434 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 DTX3LQ8TDB6 740 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 HDAC10Q969S8 669 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 HEPHQ9BQS7 1158 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 FUT8Q9BYC5 575 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ANKZF1Q9H8Y5 726 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 KCTD5Q9NXV2 234 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ASF1AQ9Y294 204 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ISM1B1AKI9 464 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 PMM2O15305 246 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 NDST3O95803 873 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 NTSP30990 170 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 PBX3P40426 434 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ERFP50548 548 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 UBXN2BQ14CS0 331 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 PFKFB4Q16877 469 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 IL27RAQ6UWB1 636 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 SYT12Q8IV01 421 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 DAW1Q8N136 415 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 FANCEQ9HB96 536 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 SEC24DO94855 1032 aaPredicted RBP10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 KCNA3P22001 575 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 GTF2E2P29084 291 aaKnown RBP10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 PLK1P53350 603 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 SPIRE1Q08AE8 756 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 RAVER1Q8IY67 606 aaKnown RBP10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ZNF398Q8TD17 642 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 SELENOMQ8WWX9 145 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 USP7Q93009 1102 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 VPS50Q96JG6 964 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 FAIM2Q9BWQ8 316 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ARHGAP39Q9C0H5 1083 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 COQ4Q9Y3A0 265 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 GLYATL1P3A0A0U1RQE8 302 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 A0A1W2PRU2 124 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 GSAPA4D1B5 854 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 LRCH4O75427 683 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 CCNDBP1O95273 360 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ATG7O95352 703 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 MLYCDO95822 493 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 MT-CO1P00395 513 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 DAB2P98082 770 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 RGS1Q08116 209 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 ABRQ12979 859 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 TMEM63BQ5T3F8 832 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 LRRC8BQ6P9F7 803 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 CRTC3Q6UUV7 619 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 P3H2Q8IVL5 708 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 RTL3Q8N8U3 475 aaKnown RBP10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 PHC3Q8NDX5 983 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 SH3RF2Q8TEC5 729 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 TFAP2BQ92481 460 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 FBXO5Q9UKT4 447 aa10.43□□□□□ -0.74
NIPAL3-201ENST00000003912 SNTNA6NMZ2 147 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 EIF2S1P05198 315 aaKnown RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 ABCB1P08183 1280 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 JAM2P57087 298 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 RAB10P61026 200 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 LPIN1Q14693 890 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 CYGBQ8WWM9 190 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 SHDQ96IW2 340 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 RAD9AQ99638 391 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 MINDY3Q9H8M7 445 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 SEMA4BQ9NPR2 832 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 HPS4Q9NQG7 708 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 TAGLN3Q9UI15 199 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 MFSD11O43934 449 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 LRIG2O94898 1065 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 ALADP13716 330 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 SEC13P55735 322 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 ZBTB17Q13105 803 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 CBX2Q14781 532 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 WLSQ5T9L3 541 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 TAPT1Q6NXT6 567 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 PRMT9Q6P2P2 845 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 PAGE2Q7Z2X7 111 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 RNF39Q9H2S5 420 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 SYBUQ9NX95 663 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 KLQ9UEF7 1012 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 ARFGEF2Q9Y6D5 1785 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 CYP7B1O75881 506 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 FGF18O76093 207 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 ABHD2P08910 425 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 ATP5F1P24539 256 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 SPAM1P38567 509 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 PBX1P40424 430 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 DRG2P55039 364 aaKnown RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 CSTF3Q12996 717 aaKnown RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 TRIP10Q15642 601 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 ASZ1Q8WWH4 475 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 VPS33AQ96AX1 596 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 INTS7Q9NVH2 962 aaKnown RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 ATAD3AQ9NVI7 634 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 SCN3BQ9NY72 215 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 FBXW11Q9UKB1 542 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 IRAK2O43187 625 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms