RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 Hist1h2acC0HKE2 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2adC0HKE3 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2aeC0HKE4 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2agC0HKE5 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2aiC0HKE6 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2anC0HKE7 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2aoC0HKE8 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2apC0HKE9 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Spata31d1dE9Q5W2 1247 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Kpna4O35343 521 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Cyp2d9P11714 504 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 DcnP28654 354 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 AcadsQ07417 412 aaKnown RBP10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Atxn2lQ7TQH0 1049 aaKnown RBP10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Pcdh19Q80TF3 1145 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist3h2aQ8BFU2 130 aaKnown RBP10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Gpat3Q8C0N2 438 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2afQ8CGP5 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2ahQ8CGP6 128 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Hist1h2akQ8CGP7 130 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 IntS13Q8QZV7 732 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 H2afjQ8R1M2 129 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Tspan8Q8R3G9 235 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Slco1a5Q91YY5 670 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Slc35a5Q921R7 437 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Ift27Q9D0P8 186 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Tmem176aQ9DCS1 244 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Aldh9a1Q9JLJ2 494 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Gm45233A0A0N4SVE0 221 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Gm5751A2AHC8 147 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Grip2G3XA20 1042 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Zw10O54692 779 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Slc2a2P14246 523 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Glb1P23780 647 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Alox5P48999 674 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Gm8773Q3UQ24 132 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Psd2Q6P1I6 770 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Dhx33Q80VY9 698 aaKnown RBP10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Atl1Q8BH66 558 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Plin5Q8BVZ1 463 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Klhl35Q9CZ49 574 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Wwp2Q9DBH0 870 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Fam205a1D3YZF6 1314 aa10.96□□□□□ -0.65
Sptan1-204ENSMUST00000113717 Gm14781A2A9Q9 366 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Spata6lB2RV46 347 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 DgkhD3YXJ0 1156 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Gm8180E9PXN0 145 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 BgnP28653 369 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Stfa3P35173 103 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Lcp2Q60787 533 aaKnown RBP10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Cdc14aQ6GQT0 603 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Tas2r104Q7M723 302 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Hectd2Q8CDU6 774 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Saysd1Q8K190 188 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Sumf1Q8R0F3 372 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Pacsin3Q99JB8 424 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Cab39lQ9DB16 337 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Zfp472B0V2W5 534 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Copz1P61924 177 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Traf6P70196 530 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Ncf4P97369 339 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Vars2Q3U2A8 1060 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Dlg4Q62108 724 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Fbxw8Q8BIA4 598 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Slc9a8Q8R4D1 576 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Scnn1bQ9WU38 638 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 VarsQ9Z1Q9 1263 aaKnown RBP10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Dgcr6O35347 198 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 PlaaP27612 794 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 CtskP55097 329 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 CidecP56198 239 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 UcmaQ14BU0 138 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 GmpsQ3THK7 693 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Rsl1d1Q8BVY0 452 aaKnown RBP10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Pih1d2Q8CHR9 315 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 B3gnt7Q8K0J2 397 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Clcn2Q9R0A1 908 aa10.96□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Gm3383J3QQ59 259 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Gm3239L7N2D9 227 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Ifi44lQ9BDB7 447 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Mgrn1Q9D074 532 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Acbd7Q9D258 88 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Nif3l1Q9EQ80 376 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Prl2a1Q9JHK0 228 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Gm6465F7A7Y6 181 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Igf2bp1O88477 577 aaKnown RBP10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 CkmP07310 381 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Atoh1P48985 351 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Taf13P61216 124 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Rpl22P67984 128 aaKnown RBP10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Mgat3Q10470 538 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Fam83hQ148V8 1209 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Alg10bQ3UGP8 474 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Scaf4Q6PFF0 1209 aaKnown RBP10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Slc39a13Q8BZH0 361 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Ubqln1Q8R317 582 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Bhmt2Q91WS4 363 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Q9CPS8 106 aa10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Hnrnpa0Q9CX86 305 aaKnown RBP10.95□□□□□ -0.66
Sptan1-204ENSMUST00000113717 Sae1Q9R1T2 350 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms