RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 1700061G19RikQ08EE8 705 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Clns1aQ61189 236 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Kcna6Q61923 529 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Q922M7 232 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Prpf19Q99KP6 504 aaKnown RBP18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 HaghlQ9DB32 283 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Prrc2bQ7TPM1 1486 aaKnown RBP18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 PtenO08586 403 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Ccng2O08918 344 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Olfr17Q7TRM9 315 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Mcph1Q7TT79 822 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Vps9d1Q8C190 649 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Dnajc14Q921R4 703 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Ubxn2aQ99KJ0 258 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Mrpl2Q9D773 306 aaKnown RBP18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Abhd2Q9QXM0 425 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Pld3O35405 488 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Trim52Q8CDV4 233 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Pcdhgb2Q91XX7 928 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Gimap3Q99MI6 301 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Fam111aQ9D2L9 613 aa18.52■□□□□ 0.56
Trim71-201ENSMUST00000111816 Prrg1A2BFE8 218 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Sp140Q6NSQ5 534 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Pbld2Q9CXN7 288 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Get4Q9D1H7 327 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Mad2l1Q9Z1B5 205 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 PtprkP35822 1457 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Slc6a2O55192 617 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Dnaaf3Q3UYV8 586 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Cyp2c29Q64458 490 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Guk1Q64520 198 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Commd7Q8BG94 200 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ldlrap1Q8C142 308 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Lars2Q8VDC0 902 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Lrrc40Q9CRC8 602 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Tssk3Q9D2E1 268 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Carm1Q9WVG6 608 aa18.52■□□□□ 0.55
Trim71-201ENSMUST00000111816 Qrich2A0A140LIY9 2337 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 L1camP11627 1260 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Rad54lP70270 747 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Hyal5Q812F3 526 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Atl1Q8BH66 558 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 LnpepQ8C129 1025 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Syne4Q8CII8 388 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Rbm47Q91WT8 590 aaKnown RBP18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ankra2Q99PE2 312 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Tmem53Q9D0Z3 276 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Pgam1Q9DBJ1 254 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Vmn2r74E9PW21 853 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 GcatO88986 416 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Polr1dP97304 133 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Mtnr1aQ61184 353 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Hpf1Q8CFE2 346 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Cacna1fQ9JIS7 1985 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Plch2A2AP18 1501 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Xlr5aA2BI45 236 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Polr3bP59470 1133 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 OgnQ62000 298 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Olfr798Q7TRH8 311 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Dhx33Q80VY9 698 aaKnown RBP18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ndufs1Q91VD9 727 aaKnown RBP18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Klhl1Q9JI74 751 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Tyw5A2RSX7 315 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Vmn2r42O35192 852 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 PtprnQ60673 979 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Spata9Q9D9R3 252 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Gm16506F7ANP4 213 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 FauP35545 74 aaKnown RBP18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 OcmP51879 109 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Epha7Q61772 998 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 EqtnQ9D9V2 337 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Plce1Q8K4S1 2282 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Fam46aD3Z5S8 447 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Nek3Q9R0A5 511 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Mettl8A2AUU0 281 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Serpina6Q06770 397 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Slc2a9Q3T9X0 538 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Slc39a14Q75N73 489 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ahsa1Q8BK64 338 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Sdhaf2Q8C6I2 164 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ift22Q9DAI2 185 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Hsd17b11Q9EQ06 298 aa18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Nup205A0A0J9YUD5 2061 aaKnown RBP18.51■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ptchd4B9EKX1 904 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Smg8Q8VE18 991 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 MbipQ99LQ1 341 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Akap3O88987 864 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ipo13Q8K0C1 963 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ptdss2Q9Z1X2 473 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Asxl2Q8BZ32 1370 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ccdc8D3YZV8 685 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Olfr564E9PWA8 316 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Gm20509G3UZF1 325 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ankrd13bQ5F259 626 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Kcnh1Q60603 989 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Podnl1Q6P3Y9 559 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Olfr832Q7TRG9 312 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Grin3bQ91ZU9 1003 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Nck1Q99M51 377 aa18.5■□□□□ 0.55
Trim71-201ENSMUST00000111816 Ing5Q9D8Y8 240 aa18.5■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms