RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 CcncQ62447 283 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gm6377Q8BHV4 303 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fam163bQ8BUM6 167 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Usp43Q8BUM9 1132 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Pdcd2lQ8C5N5 364 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Tcf25Q8R3L2 676 aaKnown RBP13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Tmem161aQ8VCA6 480 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Syt12Q920N7 421 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 LiasQ99M04 373 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fads3Q9JJE7 449 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ak1Q9R0Y5 194 aa13.5□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gm13101A2ASJ0 481 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 4930402K13RikB1AW18 415 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Bmp2P21274 394 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Slc6a13P31649 602 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Tnfaip2Q61333 691 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ptpn14Q62130 1189 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Szrd1Q6NXN1 152 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Inpp4bQ6P1Y8 924 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Prrt3Q6PE13 971 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fzd10Q8BKG4 582 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Strip2Q8C9H6 844 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Trip10Q8CJ53 603 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Mta1Q8K4B0 715 aaKnown RBP13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Rab13Q9DD03 202 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Nrxn2E9Q7X7 1710 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Olfm1O88998 485 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 RpsaP14206 295 aaKnown RBP13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Lsp1P19973 330 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 CremP27699 357 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Znf800Q0VEE6 662 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 TgdsQ8VDR7 355 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Smim14Q91VT8 99 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fcf1Q9CTH6 198 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Rnf138rt1Q9D9M9 248 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Il17rbQ9JIP3 499 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Foxe3Q9QY14 288 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 HnrnpcQ9Z204 313 aaKnown RBP13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Mup6A2AV72 179 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fam124aD3Z5V4 536 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Cd151O35566 253 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Pik3cdO35904 1043 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 H2-Eb1P04230 264 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Irf7P70434 457 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Elf3Q3UPW2 391 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Map3k7Q62073 579 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Slc13a5Q67BT3 572 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fam149b1Q6NSV7 578 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 P3h2Q8CG71 703 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gfm2Q8R2Q4 779 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ttc9bQ9D6E4 239 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 P2yr13Q9D8I2 337 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 HaghlQ9DB32 283 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Grm3Q9QYS2 879 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Plce1Q8K4S1 2282 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 NoctO35710 429 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 NfkbieO54910 364 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Slc22a2O70577 553 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Cd4P06332 457 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ces1cP23953 554 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ntrk1Q3UFB7 799 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Dmc1Q61880 340 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Olfr1505Q7TQQ2 316 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Ubap1Q8BH48 502 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 HadhaQ8BMS1 763 aaKnown RBP13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Rmdn2Q8BSE0 410 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Snx16Q8C080 344 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Cwf19l1Q8CI33 537 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fam83dQ9D7I8 585 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Spock2Q9ER58 423 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Pdpk1Q9Z2A0 559 aa13.49□□□□□ -0.25
Clcn3-204ENSMUST00000110301 FanceB8JJD6 213 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gsdmc2Q2KHK6 480 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gm11487Q5RIS0 354 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 PtprjQ64455 1238 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Klhl23Q6GQU2 558 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Snx31Q6P8Y7 439 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Exoc3l1Q8BI71 739 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Kirrel3Q8BR86 778 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Svs3bQ8BZH8 265 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Gsdmc3Q8CB12 480 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Rdh13Q8CEE7 334 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Zmiz2Q8CIE2 920 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Mrgpra2Q91WW4 305 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 TfQ921I1 697 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Mrps17Q9CQE3 120 aaKnown RBP13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Upf1Q9EPU0 1124 aaKnown RBP13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Cdh13Q9WTR5 714 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Zfp612A0A1D5RMC2 672 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Fam151bD3YUE4 279 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 BpgmP15327 259 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 C2P21180 760 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 CratP47934 626 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Rfx2P48379 717 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Usp46P62069 366 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Hoxd13P70217 339 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Vps45P97390 570 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Eif2b4Q61749 524 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Cand2Q6ZQ73 1235 aa13.48□□□□□ -0.25
Clcn3-204ENSMUST00000110301 Psapl1Q8C1C1 522 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 100.1 ms