RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Pabpn1lQ5XFR0 273 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Nuak1Q641K5 658 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Smg5Q6ZPY2 1017 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Mterf2Q8BKY8 385 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 MylipQ8BM54 445 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Naa25Q8BWZ3 972 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Pnpla8Q8K1N1 776 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Rin1Q921Q7 763 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Mgat4dQ9D4R2 373 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Trpc4Q9QUQ5 974 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Cyth1Q9QX11 398 aa23.13■■□□□ 1.29
Upf3a-201ENSMUST00000043767 SmgcF6VRN1 385 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 HcrtO55241 130 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Il3P01586 166 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 CskP41241 450 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Smad1P70340 465 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Rbm12b1Q80YR9 836 aaKnown RBP23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Rab44Q8CB87 725 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Znf668Q8K2R5 619 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Art3Q8R2G4 371 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Zdhhc12Q8VC90 267 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Wrnip1Q91XU0 660 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Sfxn1Q99JR1 322 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 DtnaQ9D2N4 746 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Efhc2Q9D485 750 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 4930578G10RikQ9D4Q4 153 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 MylkQ6PDN3 1941 aaKnown RBP23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Trbv4A0A075B5I2 113 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Nlgn4lB0F2B4 945 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Zfp963D3Z2T8 383 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 GmlE9PX31 176 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Entpd2O55026 495 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 AvilO88398 819 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Mcpt4P21812 246 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Psen1P49769 467 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 SmoP56726 793 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Arf5P84084 180 aaKnown RBP23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Slc24a2Q14BI1 711 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Fam8a1Q3URQ4 399 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Hmgb4Q6P8W9 181 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ptk7Q8BKG3 1062 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Tmtc3Q8BRH0 920 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Defb36Q8K3U4 67 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 MfrpQ8K480 584 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Stk33Q924X7 491 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Acot13Q9CQR4 140 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ssu72Q9CY97 194 aaKnown RBP23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Klhdc8bQ9D2D9 354 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Terb2Q9D494 218 aa23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Stap1Q9JM90 297 aaKnown RBP23.12■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Gm21964A0A1W2P7S4 437 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 6720489N17RikA0A1Y7VJW0 127 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ttc23lA6H6E9 458 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Pik3cdO35904 1043 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 CrymO54983 313 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Got2P05202 430 aaKnown RBP23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 RhoP15409 348 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Cxcl12P40224 93 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Mnat1P51949 309 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Zfp607aQ3TQG9 686 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Naf1Q3UMQ8 489 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Znf148Q61624 794 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Foxj1Q61660 421 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Zfp759Q7M6X3 721 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ankzf1Q80UU1 748 aaKnown RBP23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 H2-M10.2Q85ZW9 329 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Tmem82Q8R115 356 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Nxnl1Q8VC33 217 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Dnajc9Q91WN1 259 aaKnown RBP23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Gtf2ird2Q99NI3 936 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Necab3Q9D6J4 353 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Asap1Q9QWY8 1147 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Mcm3apQ9WUU9 1971 aa23.11■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Foxm1O08696 760 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Mllt10O54826 1068 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Prdx3P20108 257 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 PctpP53808 214 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Gm853Q3UNZ2 425 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Trim24Q64127 1051 aaKnown RBP23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Sirt5Q8K2C6 310 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Gtse1Q8R080 741 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Imp4Q8VHZ7 291 aaKnown RBP23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Pcdhb13Q91Y06 796 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Ppp1r16aQ923M0 524 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Sike1Q9CPR7 207 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Eml5Q8BQM8 1977 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Tex13c2A0A0G2JGA3 530 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Morc3F7BJB9 942 aaKnown RBP23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Mmp13P33435 472 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Kcnj2P35561 428 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 1700061G19RikQ08EE8 705 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Trim71Q1PSW8 855 aaKnown RBP23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Afap1l2Q5DTU0 825 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Mfsd3Q5U419 412 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Lin7aQ8JZS0 233 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Dok4Q99KE3 325 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Vps28Q9D1C8 221 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 SarnpQ9D1J3 210 aaKnown RBP23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Exoc2Q9D4H1 924 aa23.1■■□□□ 1.29
Upf3a-201ENSMUST00000043767 Nkx2-4Q9EQM3 354 aa23.1■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms