RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Sae1Q9R1T2 350 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ccnd3P30282 292 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Fam35aQ3UEN2 891 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Rgl2Q61193 778 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Prmt6Q6NZB1 378 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Hist1h2aaQ8CGP4 129 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 KmoQ91WN4 479 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mfsd10Q9D2V8 456 aaKnown RBP16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Hipk3Q9ERH7 1192 aa16.73■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 4933424G06RikA0A140LIP3 267 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Sypl2O89104 264 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ampd1Q3V1D3 745 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Nr0b1Q61066 472 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Acad10Q8K370 1069 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Onecut3Q8K557 490 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Wdsub1Q9D0I6 474 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Dpysl5Q9EQF6 564 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Rpl9-ps1S4R1R7 191 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gm6811E9Q3Y8 510 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Lrrc8bQ5DU41 803 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Olfr348Q8VGK3 313 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Serpinb1aQ9D154 379 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 PrccQ9EQC8 491 aaKnown RBP16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 HemgnQ9ERZ0 503 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Arid3bQ9Z1N7 568 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Vmn2r70K7N702 854 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Atp6v0d1P51863 351 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Dok6Q2MHE5 331 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Trafd1Q3UDK1 580 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Q3UK37 420 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Magee2Q52KG3 523 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Eva1bQ8K2Y3 164 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 GaleQ8R059 347 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Slc44a3Q921V7 656 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Stard13Q923Q2 1113 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Marc1Q9CW42 340 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Fam173bQ9D1Z3 247 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Abca17E9PX95 1733 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Fbxw9F8VPX2 458 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Slc16a8O35308 492 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Stk16O88697 305 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Hnf4aP49698 474 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Lad1P57016 528 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Msx2Q03358 267 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Dnajb14Q149L6 379 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Elmo1Q8BPU7 727 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Pcyox1lQ8C7K6 495 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Spag16Q8K450 639 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Pcdhb6Q91XZ4 772 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ubxn6Q99PL6 442 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ergic3Q9CQE7 383 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Fam227aQ9D3V8 625 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 RhojQ9ER71 214 aa16.72■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Olfr1023A2ASU6 311 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Rnf19aP50636 840 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Pdap1Q3UHX2 181 aaKnown RBP16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Naaladl1Q7M758 745 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 GskipQ8BGR8 139 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Atl1Q8BH66 558 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Fnbp1lQ8K012 605 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ints11Q9CWS4 600 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Prl2b1Q9DAZ2 228 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Zfp811A0A0J9YU71 552 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gm17175E9Q528 179 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Heg1E9Q7X6 1337 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Sema6aO35464 1031 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Rassf5Q5EBH1 413 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 ProcrQ64695 242 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Arhgap12Q8C0D4 838 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Hectd2Q8CDU6 774 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Nle1Q8VEJ4 485 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 March2Q99M02 246 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Cntnap2Q9CPW0 1332 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Atp6ap2Q9CYN9 350 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Fam45aQ9D8N2 357 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 DgkdE9PUQ8 1220 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Slc4a5E9Q3M5 1116 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Gm5814J3QP80 125 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Serpinb5P70124 375 aaKnown RBP16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 DsppP97399 934 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Snx27Q3UHD6 539 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Lcp2Q60787 533 aaKnown RBP16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Rnf219Q8K2Y0 722 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Q99LU8 229 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Pi16Q9ET66 489 aa16.71■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 CercamA3KGW5 592 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Gm6133B2RY53 190 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 MttpO08601 894 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Aldh1a7O35945 501 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Pias1O88907 651 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 LvrnQ2KHK3 559 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Aarsd1Q3THG9 412 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Rap1gap2Q5SVL6 712 aaKnown RBP16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Mapre3Q6PER3 281 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 DseQ8BLI4 958 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Ca9Q8VHB5 437 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Wdr55Q9CX97 388 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Prmt2Q9R144 448 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Cyp2g1Q9WV19 494 aa16.71■□□□□ 0.26
Ubfd1-201ENSMUST00000033158 Azin1O35484 448 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms