RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 M0R296 226 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 BNIP3LO60238 219 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 PRNPP04156 253 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 MMP2P08253 660 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 GOLGA6DP0CG33 693 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 HOXB2P14652 356 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 PSMB4P28070 264 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 CD86P42081 329 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 CLCN5P51795 746 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 DRG2P55039 364 aaKnown RBP12.46□□□□□ -0.41
LINC00339-213ENST00000642137 GEMP55040 296 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 SKOR1P84550 965 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 GPS1Q13098 491 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 GAS6Q14393 721 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 ELAVL3Q14576 367 aaKnown RBP12.46□□□□□ -0.41
LINC00339-213ENST00000642137 CRY1Q16526 586 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 C8orf74Q6P047 294 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 PCGF5Q86SE9 256 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 STK40Q8N2I9 435 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 RYBPQ8N488 228 aaPredicted RBP12.46□□□□□ -0.41
LINC00339-213ENST00000642137 SPEM1Q8N4L4 309 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 NOA1Q8NC60 698 aaKnown RBP12.46□□□□□ -0.41
LINC00339-213ENST00000642137 CHST14Q8NCH0 376 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 FLCNQ8NFG4 579 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 OR2T3Q8NH03 318 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 VOPP1Q96AW1 172 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 NSMCE3Q96MG7 304 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 ZNF641Q96N77 438 aaPredicted RBP12.46□□□□□ -0.41
LINC00339-213ENST00000642137 RBM15Q96T37 977 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC00339-213ENST00000642137 ERP44Q9BS26 406 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 OSBPL1AQ9BXW6 950 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 SUV39H2Q9H5I1 410 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 CD248Q9HCU0 757 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 GOLGA6AQ9NYA3 693 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 IL36AQ9UHA7 158 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 PPM1HQ9ULR3 514 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
LINC00339-213ENST00000642137 WASF2Q9Y6W5 498 aa12.46□□□□□ -0.41
LINC00339-213ENST00000642137 ANKRD36A6QL64 1941 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 A0A1W2PQ67 120 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 ERI2A8K979 691 aaKnown RBP12.45□□□□□ -0.42
LINC00339-213ENST00000642137 EFCAB8A8MWE9 144 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 RNASEH1O60930 286 aaKnown RBP12.45□□□□□ -0.42
LINC00339-213ENST00000642137 MT-CYBP00156 380 aaPredicted RBP12.45□□□□□ -0.42
LINC00339-213ENST00000642137 EPOP01588 193 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 AOC1P19801 751 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 IVDP26440 423 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 ADCY8P40145 1251 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 DGKEP52429 567 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 BCL2L1Q07817 233 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 SEMA5AQ13591 1074 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 IHHQ14623 411 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 FAM46CQ5VWP2 391 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 KCTD11Q693B1 232 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 CWF19L1Q69YN2 538 aaKnown RBP12.45□□□□□ -0.42
LINC00339-213ENST00000642137 CCDC70Q6NSX1 233 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 PKN3Q6P5Z2 889 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 TMEM92Q6UXU6 159 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 GDPD4Q6W3E5 623 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 Q6ZS52 159 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 BMP8AQ7Z5Y6 402 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 DSG4Q86SJ6 1040 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 SPATA22Q8NHS9 363 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 GORASP1Q9BQQ3 440 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 RAB17Q9H0T7 212 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 RSPH9Q9H1X1 276 aaPredicted RBP12.45□□□□□ -0.42
LINC00339-213ENST00000642137 ZDHHC6Q9H6R6 413 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 ATP13A3Q9H7F0 1226 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 POLMQ9NP87 494 aaPredicted RBP12.45□□□□□ -0.42
LINC00339-213ENST00000642137 RAB6BQ9NRW1 208 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 ASIC3Q9UHC3 531 aa12.45□□□□□ -0.42
LINC00339-213ENST00000642137 UTP11Q9Y3A2 253 aaKnown RBP12.45□□□□□ -0.42
LINC00339-213ENST00000642137 LOC285095A0A1B0GVY8 99 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 BHMG1C9JSJ3 638 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-213ENST00000642137 C1QTNF3-AMACRE9PGA6 284 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 SMAPO00193 183 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 TRAFD1O14545 582 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-213ENST00000642137 DNALI1O14645 258 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-213ENST00000642137 NDC80O14777 642 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 HTRA2O43464 458 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-213ENST00000642137 PI15O43692 258 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 FZD6O60353 706 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 SOCS5O75159 536 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 LEFTY1O75610 366 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 GJB3O75712 270 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 PDGFBP01127 241 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-213ENST00000642137 DCNP07585 359 aaKnown RBP12.44□□□□□ -0.42
LINC00339-213ENST00000642137 CTSLP07711 333 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 ITIH2P19823 946 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 COL9A1P20849 921 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 CA4P22748 312 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 SERPINA4P29622 427 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 GKP32189 559 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 MAGEA6P43360 314 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 VPS41P49754 854 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 COPAP53621 1224 aa12.44□□□□□ -0.42
LINC00339-213ENST00000642137 MRPS25P82663 173 aaKnown RBP12.44□□□□□ -0.42
LINC00339-213ENST00000642137 CDK16Q00536 496 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms