RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TCRBV7S3A2A0A539 114 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 SHISA7A6NL88 538 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 EPHX1P07099 455 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 HNRNPLP14866 589 aaKnown RBP eCLIP17.68■□□□□ 0.42
PHGDH-230ENST00000641927 PRKCHP24723 683 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 GKP32189 559 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 TNNT3P45378 269 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-230ENST00000641927 CARSP49589 748 aaKnown RBP17.68■□□□□ 0.42
PHGDH-230ENST00000641927 AP1S1P61966 158 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 SKOR1P84550 965 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 RAD51Q06609 339 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 MPP3Q13368 585 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 CUL1Q13616 776 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 KCNJ11Q14654 390 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 MORF4L2Q15014 288 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 MYLK3Q32MK0 819 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 HNRNPA1L2Q32P51 320 aaKnown RBP17.68■□□□□ 0.42
PHGDH-230ENST00000641927 SDE2Q6IQ49 451 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 NCEH1Q6PIU2 408 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 OR2A12Q8NGT7 310 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 PTPRN2Q92932 1015 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 TMEM245Q9H330 911 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 ZDHHC6Q9H6R6 413 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 VPS45Q9NRW7 570 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 FARP1Q9Y4F1 1045 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-230ENST00000641927 PCDHGC4Q9Y5F7 938 aa17.68■□□□□ 0.42
PHGDH-230ENST00000641927 KRBA1A5PL33 1030 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 STK25O00506 426 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 NPC1O15118 1278 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 PSMD3O43242 534 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 RNF40O75150 1001 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 USP12O75317 370 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 AP2A1O95782 977 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 MAPK8P45983 427 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 CSNK1DP48730 415 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 UBXN2BQ14CS0 331 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 FBXO43Q4G163 708 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 RALGPS1Q5JS13 557 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 HIBCHQ6NVY1 386 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-230ENST00000641927 NAT8LQ8N9F0 302 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 CHST14Q8NCH0 376 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 GRIN3AQ8TCU5 1115 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 PDCD6IPQ8WUM4 868 aaKnown RBP17.67■□□□□ 0.42
PHGDH-230ENST00000641927 PRCCQ92733 491 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-230ENST00000641927 IFT43Q96FT9 208 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 APOL2Q9BQE5 337 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 LRRC40Q9H9A6 602 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 SUN2Q9UH99 717 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 NFU1Q9UMS0 254 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 MRPS17Q9Y2R5 130 aaKnown RBP17.67■□□□□ 0.42
PHGDH-230ENST00000641927 TRIOO75962 3097 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 ERI2A8K979 691 aaKnown RBP17.67■□□□□ 0.42
PHGDH-230ENST00000641927 SIN3BO75182 1162 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 TMEM63AO94886 807 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 PIGNO95427 931 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 POP4O95707 220 aaKnown RBP17.67■□□□□ 0.42
PHGDH-230ENST00000641927 TPSB2P20231 275 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 WNT3AP56704 352 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 CAV1Q03135 178 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 BCL2L1Q07817 233 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 OLIG2Q13516 323 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 CCINQ13939 588 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 IHHQ14623 411 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 TPSAB1Q15661 275 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 TJAP1Q5JTD0 557 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 PPP1R21Q6ZMI0 780 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 HOOK3Q86VS8 718 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.67■□□□□ 0.42
PHGDH-230ENST00000641927 FBXO25Q8TCJ0 367 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 KCNV2Q8TDN2 545 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 RUBCNQ92622 972 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 ART4Q93070 314 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 FICDQ9BVA6 458 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 PARD6BQ9BYG5 372 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 ATP13A3Q9H7F0 1226 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 EIF2B3Q9NR50 452 aaKnown RBP17.67■□□□□ 0.42
PHGDH-230ENST00000641927 SHOC2Q9UQ13 582 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 RAI2Q9Y5P3 530 aa17.67■□□□□ 0.42
PHGDH-230ENST00000641927 VCANP13611 3396 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 MUC22E2RYF6 1773 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 BHMG1C9JSJ3 638 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 CTIFO43310 598 aaKnown RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 SYNCRIPO60506 623 aaKnown RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 KLF8O95600 359 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 CA4P22748 312 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 MCM3P25205 808 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 NTSR1P30989 418 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 MAGEA6P43360 314 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 VSNL1P62760 191 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 MRPS21P82921 87 aaKnown RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 SARNPP82979 210 aaKnown RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 MTM1Q13496 603 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 KCTD11Q693B1 232 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 NAPEPLDQ6IQ20 393 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 KDELC1Q6UW63 502 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 ZDHHC24Q6UX98 284 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 TRMT11Q7Z4G4 463 aaKnown RBP17.66■□□□□ 0.42
PHGDH-230ENST00000641927 CAMK1DQ8IU85 385 aa17.66■□□□□ 0.42
PHGDH-230ENST00000641927 PLPP6Q8IY26 295 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms