RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	LIG4	P49917	911 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	CLCNKB	P51801	687 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	SLC12A3	P55017	1021 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	SOX8	P57073	446 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	IL17A	Q16552	155 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	GLRA4	Q5JXX5	417 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	DGKK	Q5KSL6	1271 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	ITPRIPL1	Q6GPH6	555 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	SLC8B1	Q6J4K2	584 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	PRSS55	Q6UWB4	352 aa	Predicted RBP	6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	ALKAL1	Q6UXT8	129 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	ADGRE4P	Q86SQ3	457 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	GPBP1	Q86WP2	473 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	ZNF761	Q86XN6	746 aa	Predicted RBP	6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	CD302	Q8IX05	232 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	ELMOD1	Q8N336	334 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	TP53I13	Q8NBR0	393 aa	Predicted RBP	6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	B3GALT6	Q96L58	329 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	ZMAT2	Q96NC0	199 aa	Known RBP	6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	CLSTN3	Q9BQT9	956 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	PAAF1	Q9BRP4	392 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	ITM2C	Q9NQX7	267 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	PIH1D1	Q9NWS0	290 aa	Known RBP	6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	SLC23A1	Q9UHI7	598 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	CDH7	Q9ULB5	785 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	TCRBV7S2A1N4T	A0A589	114 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	VPS37C	A5D8V6	355 aa	Predicted RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	ISM1	B1AKI9	464 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	EIF3F	O00303	357 aa	Predicted RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	TEX33	O43247	280 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	PIGR	P01833	764 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	EDN1	P05305	212 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	SPATA31D3	P0C874	917 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	HARS	P12081	509 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	LAMP2	P13473	410 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	CYP3A5	P20815	502 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	MARCKS	P29966	332 aa	Predicted RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	OR1D2	P34982	312 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	PIK3CG	P48736	1102 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	GZMK	P49863	264 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	AFF3	P51826	1226 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	ZNF131	P52739	623 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	OSTN	P61366	133 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	CUL4A	Q13619	759 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	NFYC	Q13952	458 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	PABPC1L	Q4VXU2	614 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	ZNF385B	Q569K4	471 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	C3orf38	Q5JPI3	329 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	TPGS2	Q68CL5	300 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	SPATA31D4	Q6ZUB0	917 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	HAUS6	Q7Z4H7	955 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	KBTBD2	Q8IY47	623 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	LEMD2	Q8NC56	503 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	PRSS33	Q8NF86	280 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	ZNF461	Q8TAF7	563 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	SLC35B2	Q8TB61	432 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	CFHR4	Q92496	578 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	RABGGTA	Q92696	567 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	RAD54L	Q92698	747 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	RSRC1	Q96IZ7	334 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	MRI1	Q9BV20	369 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	SACM1L	Q9NTJ5	587 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	UBQLN1	Q9UMX0	589 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	CDY1	Q9Y6F8	540 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	DENND4A	Q7Z401	1863 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	UBE2QL1	A1L167	161 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	PRSS29P	A6NIE9	313 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	ANHX	E9PGG2	379 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	PRRG1	O14668	218 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	ZNF197	O14709	1029 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	KIAA0391	O15091	583 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	OGT	O15294	1046 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	STC2	O76061	302 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	MATN4	O95460	622 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	AOC1	P19801	751 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	TKT	P29401	623 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	LRPAP1	P30533	357 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	VCP	P55072	806 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	PLD1	Q13393	1074 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	MRPL49	Q13405	166 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	HTR4	Q13639	388 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	ALCAM	Q13740	583 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	CTXN3	Q4LDR2	81 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	KLHDC7A	Q5VTJ3	777 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	IZUMO3	Q5VZ72	239 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	GRASP	Q7Z6J2	395 aa	Predicted RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	USP37	Q86T82	979 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	SLC44A3	Q8N4M1	653 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	CCDC33	Q8N5R6	958 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	LARP4B	Q92615	738 aa	Known RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	ATOH1	Q92858	354 aa	Predicted RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	USP13	Q92995	863 aa	Predicted RBP	6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	MYADM	Q96S97	322 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	PLIN2	Q99541	437 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	REEP2	Q9BRK0	252 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	CHCHD6	Q9BRQ6	235 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	TTLL2	Q9BWV7	592 aa		6.61	□□□□□ -1.35
CASC19-238	ENST00000641523	CCSER1	Q9C0I3	900 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms