RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ZC3H12BQ5HYM0 836 aaKnown RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 APLFQ8IW19 511 aaPredicted RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 CFAP52Q8N1V2 620 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 CMASQ8NFW8 434 aaPredicted RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 HIC2Q96JB3 615 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 SLC9A7Q96T83 725 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 SPG21Q9NZD8 308 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 GMIPQ9P107 970 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 PIK3CGP48736 1102 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 CACNA2D1P54289 1103 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 TRAF2Q12933 501 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 TXNRD3NBQ6F5E7 133 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 ZNF557Q8N988 423 aaPredicted RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 ZSCAN18Q8TBC5 510 aaPredicted RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 GFM2Q969S9 779 aaKnown RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 VPS33AQ96AX1 596 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 MFSD3Q96ES6 412 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 ZNF184Q99676 751 aaPredicted RBP17.73■□□□□ 0.43
SCARB2-223ENST00000640640 DTLQ9NZJ0 730 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 SH3BP4Q9P0V3 963 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 RABGEF1Q9UJ41 708 aa17.73■□□□□ 0.43
SCARB2-223ENST00000640640 MYH6P13533 1939 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 C15orf38-AP3S2A0A0A6YYH1 394 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 RGSL1A5PLK6 1076 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 PCDH8O95206 1070 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 WARSP23381 471 aaKnown RBP17.72■□□□□ 0.43
SCARB2-223ENST00000640640 CLK1P49759 484 aaKnown RBP17.72■□□□□ 0.43
SCARB2-223ENST00000640640 CNTN1Q12860 1018 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 CA9Q16790 459 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 ANKS1BQ7Z6G8 1248 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 ARPINQ7Z6K5 226 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 MICU2Q8IYU8 434 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 CLEC4CQ8WTT0 213 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 BORCS6Q96GS4 357 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 PLEKHA8Q96JA3 519 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 COMMD8Q9NX08 183 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 ATP6AP2A0A1C7CYW4 349 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 PEX11AO75192 247 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 ATP6AP2O75787 350 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 VCLP18206 1134 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 IL1R2P27930 398 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 RAD23AP54725 363 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 VAC14Q08AM6 782 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 SMARCB1Q12824 385 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 TAC4Q86UU9 113 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 PLD3Q8IV08 490 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 ZDHHC6Q9H6R6 413 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 PNPOQ9NVS9 261 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 PACSIN3Q9UKS6 424 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 CYP2A6P11509 494 aaPredicted RBP17.72■□□□□ 0.43
SCARB2-223ENST00000640640 ADRM1Q16186 407 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 INSCQ1MX18 579 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 FAM98BQ52LJ0 330 aaKnown RBP17.72■□□□□ 0.43
SCARB2-223ENST00000640640 OTUD3Q5T2D3 398 aaPredicted RBP17.72■□□□□ 0.43
SCARB2-223ENST00000640640 CLNKQ7Z7G1 428 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 SERAC1Q96JX3 654 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 TMEM79Q9BSE2 394 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 AGO3Q9H9G7 860 aaKnown RBP17.72■□□□□ 0.43
SCARB2-223ENST00000640640 SUFUQ9UMX1 484 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 LTBP3Q9NS15 1303 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 MYH10P35580 1976 aa17.72■□□□□ 0.43
SCARB2-223ENST00000640640 TMEM63AO94886 807 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 POLR2EP19388 210 aaKnown RBP17.71■□□□□ 0.43
SCARB2-223ENST00000640640 TRIM48Q8IWZ4 208 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 PHACTR4Q8IZ21 702 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 HJURPQ8NCD3 748 aaPredicted RBP17.71■□□□□ 0.43
SCARB2-223ENST00000640640 FIG4Q92562 907 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 SLCO2A1Q92959 643 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 IFRD1O00458 451 aaPredicted RBP17.71■□□□□ 0.43
SCARB2-223ENST00000640640 TCF4P15884 667 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 ACOX1Q15067 660 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 PPP1R15BQ5SWA1 713 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 CCDC81Q6ZN84 652 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 ADCK1Q86TW2 530 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 OR4L1Q8NH43 312 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 BDH2Q9BUT1 245 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 ATP13A3Q9H7F0 1226 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 KLQ9UEF7 1012 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 ZNF180Q9UJW8 692 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 TRAV19A0A0A6YYK7 116 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 C1orf232A0A0U1RR37 186 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 HNRNPCL2B2RXH8 293 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 RGS14O43566 566 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 DEAF1O75398 565 aaPredicted RBP17.71■□□□□ 0.43
SCARB2-223ENST00000640640 NEK3P51956 506 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 ECHDC2Q86YB7 292 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 LPIN3Q9BQK8 851 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 COPS7BQ9H9Q2 264 aaPredicted RBP17.71■□□□□ 0.43
SCARB2-223ENST00000640640 EXOSC4Q9NPD3 245 aaKnown RBP17.71■□□□□ 0.43
SCARB2-223ENST00000640640 ASAH2Q9NR71 780 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 NUP98P52948 1817 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 DOT1LQ8TEK3 1739 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 CD3EAPO15446 510 aaKnown RBP17.71■□□□□ 0.43
SCARB2-223ENST00000640640 TYMPP19971 482 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 TKTP29401 623 aaKnown RBP17.71■□□□□ 0.43
SCARB2-223ENST00000640640 GRK3P35626 688 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 CHI3L1P36222 383 aaPredicted RBP17.71■□□□□ 0.43
SCARB2-223ENST00000640640 CDH13P55290 713 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 CORO1BQ9BR76 489 aa17.71■□□□□ 0.43
SCARB2-223ENST00000640640 SLC7A5P2Q9GIP4 190 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms