RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 OLAHQ9NV23 265 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 NSMCE4AQ9NXX6 385 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 NCKIPSDQ9NZQ3 722 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 GMPR2Q9P2T1 348 aaKnown RBP11.04□□□□□ -0.64
SNIP1-204ENST00000638725 RBPJLQ9UBG7 517 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 UBQLN1Q9UMX0 589 aaKnown RBP11.04□□□□□ -0.64
SNIP1-204ENST00000638725 RALGAPA2Q2PPJ7 1873 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 H3BNH8 94 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 MAGEB3O15480 346 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 NPHS1O60500 1241 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 COL6A2P12110 1019 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 NPR3P17342 541 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 CKMT2P17540 419 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 RPL10P27635 214 aaKnown RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 PSMD8P48556 350 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 TKTL1P51854 596 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 MAP3K7CLP57077 242 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 TMED1Q13445 227 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 LAMC2Q13753 1193 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 FASTKQ14296 549 aaKnown RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 MARCH8Q5T0T0 291 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 ESRP1Q6NXG1 681 aaKnown RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 FAM43BQ6ZT52 329 aaPredicted RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 PAQR9Q6ZVX9 377 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 FAM110BQ8TC76 370 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 PPP1R13LQ8WUF5 828 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 HEXDCQ8WVB3 486 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 IRGQQ8WZA9 623 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 ELMO2Q96JJ3 720 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 HNRNPABQ99729 332 aaKnown RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 ULBP1Q9BZM6 244 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 NOL11Q9H8H0 719 aaKnown RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 PPP1R1BQ9UD71 204 aaPredicted RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 TRHDEQ9UKU6 1024 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 CNOT6Q9ULM6 557 aaKnown RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 MYRFQ9Y2G1 1151 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 GMEB1Q9Y692 573 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 YJEFN3A6XGL0 299 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 H0YJX3 145 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 NCAM2O15394 837 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 HTRA2O43464 458 aaPredicted RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 TIPRLO75663 272 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 MT-CYBP00156 380 aaPredicted RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 CCDC166P0CW27 439 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 KCNA5P22460 613 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 CDK9P50750 372 aaKnown RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 GJA9P57773 515 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 TAS2R39P59534 338 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 C1QTNF8P60827 252 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 SOX4Q06945 474 aaPredicted RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 GALNT2Q10471 571 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 LPIN1Q14693 890 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 GRIK4Q16099 956 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 CLEC20AQ6ZU45 233 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 ARMCX2Q7L311 632 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 RMND5BQ96G75 393 aaPredicted RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 TNIP3Q96KP6 325 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 SLC39A3Q9BRY0 314 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 C16orf70Q9BSU1 422 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 FAM49AQ9H0Q0 323 aaPredicted RBP11.03□□□□□ -0.64
SNIP1-204ENST00000638725 CDHR5Q9HBB8 845 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 SLC2A6Q9UGQ3 507 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 TSC2P49815 1807 aa11.03□□□□□ -0.64
SNIP1-204ENST00000638725 SMIM28A0A1B0GU29 152 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 TCRBV3S1A0A5B6 114 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 ZNF839A8K0R7 811 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 FZD9O00144 591 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 PSMD12O00232 456 aaPredicted RBP11.02□□□□□ -0.64
SNIP1-204ENST00000638725 UBDO15205 165 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 MT-CO1P00395 513 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 ARNTP27540 789 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 STX5Q13190 355 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 PITRM1Q5JRX3 1037 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 C6orf10Q5SRN2 563 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 PKN3Q6P5Z2 889 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 POTEHQ6S545 545 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 ALKAL1Q6UXT8 129 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 CHSY3Q70JA7 882 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 PIWIL4Q7Z3Z4 852 aaKnown RBP11.02□□□□□ -0.64
SNIP1-204ENST00000638725 ERI1Q8IV48 349 aaKnown RBP11.02□□□□□ -0.64
SNIP1-204ENST00000638725 FIBCD1Q8N539 461 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 OR9I1Q8NGQ6 314 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 NTAN1Q96AB6 310 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 PPWD1Q96BP3 646 aaKnown RBP11.02□□□□□ -0.64
SNIP1-204ENST00000638725 ZNF560Q96MR9 790 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 FAM210AQ96ND0 272 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 CAMKK2Q96RR4 588 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 PNPLA3Q9NST1 481 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 DDIT4Q9NX09 232 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 CHCHD3Q9NX63 227 aaKnown RBP11.02□□□□□ -0.64
SNIP1-204ENST00000638725 GDAP2Q9NXN4 497 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 RAD54BQ9Y620 910 aa11.02□□□□□ -0.64
SNIP1-204ENST00000638725 H3BRB1 525 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 MRASO14807 208 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 AURKAO14965 403 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 MTSS1O43312 755 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 HUS1O60921 280 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.65
SNIP1-204ENST00000638725 SLC7A1P30825 629 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms