RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	LCP1	P13796	627 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	EPHX2	P34913	555 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	RPS3A	P61247	264 aa	Known RBP	13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	NME3	Q13232	169 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CAPS	Q13938	189 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	DGKD	Q16760	1214 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	REP15	Q6BDI9	236 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	DHFR2	Q86XF0	187 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ACD	Q96AP0	544 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CACNA2D2	Q9NY47	1150 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CPSF3	Q9UKF6	684 aa	Known RBP	13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	B3GNT3	Q9Y2A9	372 aa		13.81	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SI	P14410	1827 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CCDC162P	A2VCL2	907 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	TRIM64B	A6NI03	449 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ZNF487	B1APH4	448 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CTSH	P09668	335 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ZNF182	P17025	639 aa	Predicted RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ETFB	P38117	255 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	IREB2	P48200	963 aa	Known RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	GALNT2	Q10471	571 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	NFATC3	Q12968	1075 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	VGLL4	Q14135	290 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	PAN2	Q504Q3	1202 aa	Known RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	KCTD8	Q6ZWB6	473 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CANT1	Q8WVQ1	401 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CYGB	Q8WWM9	190 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	AGAP2	Q99490	1192 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	C1orf50	Q9BV19	199 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	TDRD1	Q9BXT4	1180 aa	Known RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SACM1L	Q9NTJ5	587 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514		A0A087WZ62	844 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	KPNA4	O00629	521 aa	Predicted RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	DYNC1LI2	O43237	492 aa	Predicted RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	HSPA8	P11142	646 aa	Known RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	VDR	P11473	427 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	PABPC1	P11940	636 aa	Known RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CCNA2	P20248	432 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	S100A1	P23297	94 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	GTF2A2	P52657	109 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	GNA12	Q03113	381 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	LRP8	Q14114	963 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SAMD4B	Q5PRF9	694 aa	Known RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	IRAK1BP1	Q5VVH5	260 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	GALNT18	Q6P9A2	607 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	NSMCE3	Q96MG7	304 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	DTL	Q9NZJ0	730 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	NCKIPSD	Q9NZQ3	722 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	HACD3	Q9P035	362 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SEPT3	Q9UH03	358 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	IQCA1L	A6NCM1	817 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	TRPC5OS	A6NMA1	111 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CILP	O75339	1184 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	JAK1	P23458	1154 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	NEK2	P51955	445 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ZBTB17	Q13105	803 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	NEDD8	Q15843	81 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	C6orf10	Q5SRN2	563 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	INTS11	Q5TA45	600 aa	Known RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ZC3H7A	Q8IWR0	971 aa	Known RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	LSMEM2	Q8N112	164 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	OR2T34	Q8NGX1	318 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	OR2T3	Q8NH03	318 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	TAMM41	Q96BW9	452 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	OLFM1	Q99784	485 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ARMC1	Q9NVT9	282 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	TLK1	Q9UKI8	766 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SARDH	Q9UL12	918 aa		13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.8	□□□□□ -0.2
KCNMA1-238	ENST00000638514	C1orf232	A0A0U1RR37	186 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	RNF103-CHMP3	A0A140T963	221 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	DLGAP1	O14490	977 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	TIMM44	O43615	452 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	BCL10	O95999	233 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	UBA1	P22314	1058 aa	Known RBP	13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	PSMB4	P28070	264 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	GRIA3	P42263	894 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ABRAXAS1	Q6UWZ7	409 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ZMAT2	Q96NC0	199 aa	Known RBP	13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	PGLYRP2	Q96PD5	576 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CGREF1	Q99674	301 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	LRRC40	Q9H9A6	602 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CD300A	Q9UGN4	299 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SDHD	O14521	159 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CLOCK	O15516	846 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	LY75	O60449	1722 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SRP72	O76094	671 aa	Known RBP	13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SP2	Q02086	613 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	INA	Q16352	499 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	FER1L6	Q2WGJ9	1857 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SLC36A3	Q495N2	470 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	ATF7IP2	Q5U623	682 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	EEF1DP3	Q658K8	133 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	CCDC138	Q96M89	665 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	LGMN	Q99538	433 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	GBA2	Q9HCG7	927 aa	Predicted RBP	13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	RIC8B	Q9NVN3	520 aa		13.79	□□□□□ -0.2
KCNMA1-238	ENST00000638514	SFMBT1	Q9UHJ3	866 aa		13.79	□□□□□ -0.2

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