RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 MYEOVQ96EZ4 313 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 FAM167BQ9BTA0 163 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 MMADHCQ9H3L0 296 aaPredicted RBP21.74■■□□□ 1.07
CLN6-224ENST00000638076 FBXO5Q9UKT4 447 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 H2AFYO75367 372 aaKnown RBP21.74■■□□□ 1.07
CLN6-224ENST00000638076 AOC1P19801 751 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 OR1E1P30953 314 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 ETFBP38117 255 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 CD151P48509 253 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 NUMBP49757 651 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 RING1Q06587 406 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 SNX30Q5VWJ9 437 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 NADSYN1Q6IA69 706 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 NEPROQ6NW34 567 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 ZYG11AQ6WRX3 759 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 ANKS3Q6ZW76 656 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 LCA5Q86VQ0 697 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 FSTL5Q8N475 847 aaPredicted RBP21.74■■□□□ 1.07
CLN6-224ENST00000638076 GPATCH11Q8N954 259 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 RDH11Q8TC12 318 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 MOCOSQ96EN8 888 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 ELMO2Q96JJ3 720 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 TTPALQ9BTX7 342 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 CDH19Q9H159 772 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 C15orf41Q9Y2V0 281 aa21.74■■□□□ 1.07
CLN6-224ENST00000638076 DIAPH2O60879 1101 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 ZDHHC11BP0C7U3 371 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 COL6A2P12110 1019 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 PGM1P36871 562 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 PGBD5Q8N414 524 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 BCL7CQ8WUZ0 217 aaPredicted RBP21.73■■□□□ 1.07
CLN6-224ENST00000638076 COMMD8Q9NX08 183 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 SLC38A8A6NNN8 435 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 H0Y3Z8 333 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 ATF6P18850 670 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 ACVRL1P37023 503 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 KCNQ1P51787 676 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 IL10RBQ08334 325 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 SERINC3Q13530 473 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 PARP15Q460N3 678 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 TSTD2Q5T7W7 516 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 LIPMQ5VYY2 423 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 LRRC8EQ6NSJ5 796 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 CRIPAKQ8N1N5 446 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 SH3TC2Q8TF17 1288 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 RANBP9Q96S59 729 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 COG4Q9H9E3 785 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 ACSS2Q9NR19 701 aa21.73■■□□□ 1.07
CLN6-224ENST00000638076 TET1Q8NFU7 2136 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 AURKAO14965 403 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 HOXA2O43364 376 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 KLHL2O95198 593 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 TPBGLP0DKB5 382 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 MSLNQ13421 630 aaPredicted RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 KHDC1Q4VXA5 237 aaKnown RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 CFAP157Q5JU67 520 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 ARHGAP24Q8N264 748 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 SPATA6LQ8N4H0 392 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 ARRDC2Q8TBH0 407 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 AGR3Q8TD06 166 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 C2orf15Q8WU43 125 aaKnown RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 NXNL1Q96CM4 212 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 TMEM175Q9BSA9 504 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 TACO1Q9BSH4 297 aaKnown RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 MRPL9Q9BYD2 267 aaKnown RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 UXTQ9UBK9 157 aaPredicted RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 GREB1Q4ZG55 1949 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 TACR2P21452 398 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 TAS2R39P59534 338 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 TNK2Q07912 1038 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 KPNB1Q14974 876 aaKnown RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 ACBD5Q5T8D3 534 aaPredicted RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 CNSTQ6PJW8 725 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 ENDOVQ8N8Q3 282 aaKnown RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 TDRD5Q8NAT2 981 aaKnown RBP21.72■■□□□ 1.07
CLN6-224ENST00000638076 STYXQ8WUJ0 223 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 XPR1Q9UBH6 696 aa21.72■■□□□ 1.07
CLN6-224ENST00000638076 PITPNM1O00562 1244 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 CHRNGP07510 517 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 MYL4P12829 197 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 DNAJB1P25685 340 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 CRABP2P29373 138 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 GRIA4P48058 902 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 MAPKAPK2P49137 400 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 DLG1Q12959 904 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 LBRQ14739 615 aaKnown RBP21.71■■□□□ 1.07
CLN6-224ENST00000638076 FBXO22Q8NEZ5 403 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 OR13J1Q8NGT2 312 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 SCLYQ96I15 445 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 GPR78Q96P69 363 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 UNKQ9C0B0 810 aaKnown RBP21.71■■□□□ 1.07
CLN6-224ENST00000638076 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.71■■□□□ 1.07
CLN6-224ENST00000638076 MIA3Q5JRA6 1907 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 TARM1B6A8C7 271 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 ADAM12O43184 909 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 GJB3O75712 270 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 MXRA7P84157 204 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 ZNF789Q5FWF6 425 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 SIRPB2Q5JXA9 342 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms