RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TOP3AQ13472 1001 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 CBX2Q14781 532 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 LRRC49Q8IUZ0 686 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 TRIM39Q9HCM9 518 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 ARHGAP31Q2M1Z3 1444 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 KANSL1LA0AUZ9 987 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 SP140Q13342 867 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 PAGE2BQ5JRK9 111 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 SPATA9Q9BWV2 254 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 NCAM2O15394 837 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 SPAG6O75602 509 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 SERPINA3P01011 423 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 FSTL1Q12841 308 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 GIT2Q14161 759 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 PABPC1LQ4VXU2 614 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 FNBP1LQ5T0N5 605 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 OR10H5Q8NGA6 315 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 DNAJA3Q96EY1 480 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 STX16-NPEPL1H3BU86 382 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 CACNB4O00305 520 aaPredicted RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 STX16O14662 325 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 SMAD9O15198 467 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 RGS20O76081 388 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 MPOP05164 745 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 ELK3P41970 407 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 RPL38P63173 70 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 ZCWPW2Q504Y3 356 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 IZUMO2Q6UXV1 221 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 LINGO4Q6UY18 593 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 FAM81AQ8TBF8 368 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 TSEN15Q8WW01 171 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 SHROOM2Q13796 1616 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 ALDH4A1P30038 563 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 CCT3P49368 545 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 MTA1Q13330 715 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 RACGAP1Q9H0H5 632 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 PARPBPQ9NWS1 579 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 COMMD9Q9P000 198 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 GYPCP04921 128 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 MUTP22033 750 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 ELAVL2Q12926 359 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 JAZF1Q86VZ6 243 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 HTR3CQ8WXA8 447 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 PANX3Q96QZ0 392 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 PNO1Q9NRX1 252 aaKnown RBP17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 GNPTGQ9UJJ9 305 aa17.99■□□□□ 0.47
CACNA1A-227ENST00000636549 OR10H3O60404 316 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 APODP05090 189 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 EIF2B2P49770 351 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 NRLP54845 237 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 TRAF3Q13114 568 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 PPP1R15BQ5SWA1 713 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 DSN1Q9H410 356 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 HIPK3Q9H422 1215 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 IKZF2Q9UKS7 526 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 PCDHAC2Q9Y5I4 1007 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 ABATP80404 500 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 KIAA0319LQ8IZA0 1049 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC22A8Q8TCC7 542 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 SPATA31A6Q5VVP1 1343 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 PEX10O60683 326 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 PSMD4P55036 377 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 NOMO2Q5JPE7 1267 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 TTC37Q6PGP7 1564 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 SGSM3Q96HU1 749 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC40A1Q9NP59 571 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 HYKKA2RU49 373 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 DNASE1L1P49184 302 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 CYP4F8P98187 520 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 DUSP4Q13115 394 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 TRIM40Q6P9F5 258 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 HDDC3Q8N4P3 179 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 ZNF276Q8N554 614 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 CHST4Q8NCG5 386 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 POLR1EQ9GZS1 481 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 CCNOP22674 350 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 RAB27AP51159 221 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 NAB1Q13506 487 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 DNASE1L2Q92874 299 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 LDAHQ9H6V9 325 aa17.98■□□□□ 0.47
CACNA1A-227ENST00000636549 GNALP38405 381 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 GMFBP60983 142 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 CCINQ13939 588 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 PCBP2Q15366 365 aaKnown RBP eCLIP17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 SLC30A6Q6NXT4 461 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 DHFR2Q86XF0 187 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 FAM110BQ8TC76 370 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 BTBD7Q9P203 1132 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 ZNF214Q9UL59 606 aaPredicted RBP17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 FASP25445 335 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 VHLP40337 213 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 SGCBQ16585 318 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 RAVER1Q8IY67 606 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 AARSD1Q9BTE6 412 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 DMTF1Q9Y222 760 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 PTPRAP18433 802 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 WARSP23381 471 aaKnown RBP17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 CDC25CP30307 473 aa17.97■□□□□ 0.47
CACNA1A-227ENST00000636549 OR8D1Q8WZ84 308 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms