RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 OR13H1Q8NG92 308 aa19.23■□□□□ 0.67
CLN6-213ENST00000636212 NOL6Q9H6R4 1146 aaKnown RBP19.23■□□□□ 0.67
CLN6-213ENST00000636212 GPATCH2LQ9NWQ4 482 aa19.23■□□□□ 0.67
CLN6-213ENST00000636212 A0A1W2PQJ5 194 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 DDX3XO00571 662 aaKnown RBP eCLIP19.22■□□□□ 0.672e-13■■■□□ 16.8
CLN6-213ENST00000636212 SDC3O75056 442 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 TPM3P06753 285 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 ALPPL2P10696 532 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 HNF1BP35680 557 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 CLDN2P57739 230 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 PPP6R3Q5H9R7 873 aaPredicted RBP19.22■□□□□ 0.67
CLN6-213ENST00000636212 CFAP58Q5T655 872 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 DHRS13Q6UX07 377 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 KYAT3Q6YP21 454 aaKnown RBP19.22■□□□□ 0.67
CLN6-213ENST00000636212 GCNT7Q6ZNI0 430 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 Q6ZSR6 202 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 ABI3BPQ7Z7G0 1075 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 DNAAF5Q86Y56 855 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 CXorf40AQ8TE69 158 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 IFT43Q96FT9 208 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 SNRNP25Q9BV90 132 aaKnown RBP19.22■□□□□ 0.67
CLN6-213ENST00000636212 C1QTNF7Q9BXJ2 289 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 CCDC86Q9H6F5 360 aaKnown RBP19.22■□□□□ 0.67
CLN6-213ENST00000636212 MFHAS1Q9Y4C4 1052 aa19.22■□□□□ 0.67
CLN6-213ENST00000636212 CHD5Q8TDI0 1954 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 IGLON5A6NGN9 336 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 CKMT2P17540 419 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 MIPP30301 263 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 MAP1BP46821 2468 aaKnown RBP19.21■□□□□ 0.67
CLN6-213ENST00000636212 RABIFP47224 123 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 SUOXP51687 545 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 ACAP1Q15027 740 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 TMPRSS12Q86WS5 348 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 ASB12Q8WXK4 309 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 SYN2Q92777 582 aaPredicted RBP19.21■□□□□ 0.67
CLN6-213ENST00000636212 LENG8Q96PV6 779 aaPredicted RBP19.21■□□□□ 0.67
CLN6-213ENST00000636212 C1QTNF2Q9BXJ5 285 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 CPEB1Q9BZB8 566 aaKnown RBP19.21■□□□□ 0.67
CLN6-213ENST00000636212 KLC2Q9H0B6 622 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 ZWILCHQ9H900 591 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 DKK3Q9UBP4 350 aa19.21■□□□□ 0.67
CLN6-213ENST00000636212 CACNA1BQ00975 2339 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 NEMP2A6NFY4 417 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 H3BM21 787 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 SERPING1P05155 500 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 ABL2P42684 1182 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 ELP6Q0PNE2 266 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 DNAJC3Q13217 504 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 ILKQ13418 452 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 SMAD1Q15797 465 aaKnown RBP19.2■□□□□ 0.66
CLN6-213ENST00000636212 E4F1Q66K89 784 aaPredicted RBP19.2■□□□□ 0.66
CLN6-213ENST00000636212 RFX8Q6ZV50 586 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 PAF1Q8N7H5 531 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 DENND6BQ8NEG7 585 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 HCAR2Q8TDS4 363 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 CELF6Q96J87 481 aaKnown RBP19.2■□□□□ 0.66
CLN6-213ENST00000636212 KCTD15Q96SI1 283 aaPredicted RBP19.2■□□□□ 0.66
CLN6-213ENST00000636212 ISCUQ9H1K1 167 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 LRRC19Q9H756 370 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 SP110Q9HB58 689 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 EVA1BQ9NVM1 165 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 DNAJC28Q9NX36 388 aa19.2■□□□□ 0.66
CLN6-213ENST00000636212 EPG5Q9HCE0 2579 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 DFFAO00273 331 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 PRAMEF11O60813 436 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 PALMO75781 387 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 ERCC2P18074 760 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 DGKAP23743 735 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 PCK1P35558 622 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 ARL4AP40617 200 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 PAPOLAP51003 745 aaKnown RBP19.19■□□□□ 0.66
CLN6-213ENST00000636212 HNRNPKP61978 463 aaKnown RBP eCLIP19.19■□□□□ 0.66
CLN6-213ENST00000636212 ZBED6P86452 979 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 DAB2P98082 770 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 ZNF211Q13398 564 aaPredicted RBP19.19■□□□□ 0.66
CLN6-213ENST00000636212 PTK2BQ14289 1009 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 CA9Q16790 459 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 LZTR1Q8N653 840 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 CPLX3Q8WVH0 158 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 EXOC2Q96KP1 924 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 LHX3Q9UBR4 397 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 ITM2BQ9Y287 266 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 LUC7L2Q9Y383 392 aaKnown RBP19.19■□□□□ 0.66
CLN6-213ENST00000636212 CEP295Q9C0D2 2601 aa19.19■□□□□ 0.66
CLN6-213ENST00000636212 SRRM3A6NNA2 597 aaPredicted RBP19.18■□□□□ 0.66
CLN6-213ENST00000636212 H3BRJ5 948 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 J3KR12 359 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 LRCH4O75427 683 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 PIAS2O75928 621 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 TM7SF2O76062 418 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 JUPP14923 745 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 HCAR3P49019 387 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 ACADVLP49748 655 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 THOP1P52888 689 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 PDE1CQ14123 709 aaPredicted RBP19.18■□□□□ 0.66
CLN6-213ENST00000636212 FGL2Q14314 439 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 PIGHQ14442 188 aaPredicted RBP19.18■□□□□ 0.66
CLN6-213ENST00000636212 CYTH1Q15438 398 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 NFKBIBQ15653 356 aa19.18■□□□□ 0.66
CLN6-213ENST00000636212 SKOR2Q2VWA4 1001 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms