RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 GABRR2P28476 465 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 GGT5P36269 586 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 VEGFBP49765 207 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 KHDC1Q4VXA5 237 aaKnown RBP7.59□□□□□ -1.19
PKP4-217ENST00000628904 ARL13AQ5H913 290 aaPredicted RBP7.59□□□□□ -1.19
PKP4-217ENST00000628904 OTUD1Q5VV17 481 aaPredicted RBP7.59□□□□□ -1.19
PKP4-217ENST00000628904 ZNF534Q76KX8 674 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 GLT6D1Q7Z4J2 308 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 SNX32Q86XE0 403 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 FSTL5Q8N475 847 aaPredicted RBP7.59□□□□□ -1.19
PKP4-217ENST00000628904 RBM15BQ8NDT2 890 aaKnown RBP7.59□□□□□ -1.19
PKP4-217ENST00000628904 OR4K2Q8NGD2 314 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 SHKBP1Q8TBC3 707 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 IL22Q9GZX6 179 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 ILKAPQ9H0C8 392 aaPredicted RBP7.59□□□□□ -1.19
PKP4-217ENST00000628904 DENND2DQ9H6A0 471 aaPredicted RBP7.59□□□□□ -1.19
PKP4-217ENST00000628904 COG4Q9H9E3 785 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 DCDC2Q9UHG0 476 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 TIMM22Q9Y584 194 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 DOCK1Q14185 1865 aa7.59□□□□□ -1.19
PKP4-217ENST00000628904 ATAD5Q96QE3 1844 aa7.59□□□□□ -1.2
PKP4-217ENST00000628904 ARHGAP10A1A4S6 786 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 STX16-NPEPL1H3BU86 382 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 DCLK1O15075 740 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 PRPF4O43172 522 aaKnown RBP eCLIP7.58□□□□□ -1.21e-9■■■□□ 15.2
PKP4-217ENST00000628904 TRIM13O60858 407 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 NBNO60934 754 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 URODP06132 367 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 ALPIP09923 528 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 CSF2RAP15509 400 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 ADAM17P78536 824 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 BNIP1Q12981 228 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 RBBP7Q16576 425 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
PKP4-217ENST00000628904 FRA10AC1Q70Z53 315 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 TREML1Q86YW5 311 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 PHTF2Q8N3S3 785 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 C10orf82Q8WW14 230 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 ARNTL2Q8WYA1 636 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 MYEOVQ96EZ4 313 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 SUSD3Q96L08 255 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 GBA3Q9H227 469 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 PIDD1Q9HB75 910 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 SCUBE2Q9NQ36 999 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 THAP1Q9NVV9 213 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 COPG2Q9UBF2 871 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 PRKAG2Q9UGJ0 569 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 CD84Q9UIB8 345 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 ZMYM5Q9UJ78 669 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 SH3BP1Q9Y3L3 701 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 PTGDR2Q9Y5Y4 395 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 TNS1Q9HBL0 1735 aaKnown RBP7.58□□□□□ -1.2
PKP4-217ENST00000628904 HACD1B0YJ81 288 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 CCL16O15467 120 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 PLIN3O60664 434 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 XPAP23025 273 aaPredicted RBP7.58□□□□□ -1.2
PKP4-217ENST00000628904 ARSDP51689 593 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 ECT2LQ008S8 904 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 IL1RL1Q01638 556 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 DDX39BQ13838 428 aaKnown RBP7.58□□□□□ -1.2
PKP4-217ENST00000628904 MS4A13Q5J8X5 152 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 ACAD11Q709F0 780 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 MILR1Q7Z6M3 343 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 CNPY4Q8N129 248 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 ARHGAP24Q8N264 748 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 OR52B2Q96RD2 323 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 CPNE1Q99829 537 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 GATA5Q9BWX5 397 aaPredicted RBP7.58□□□□□ -1.2
PKP4-217ENST00000628904 TLE6Q9H808 572 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 TCF7L2Q9NQB0 619 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 NCKIPSDQ9NZQ3 722 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 MOSPD1Q9UJG1 213 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 AURKCQ9UQB9 309 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 WASF2Q9Y6W5 498 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 A0A1W2PRU2 124 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 MTX2O75431 263 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 GLP2RO95838 553 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 FGFR3P22607 806 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 PBLDP30039 288 aaPredicted RBP7.58□□□□□ -1.2
PKP4-217ENST00000628904 ENPEPQ07075 957 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 XRCC4Q13426 336 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 SLC9B1Q4ZJI4 515 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 PLPP4Q5VZY2 271 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 FAM151BQ6UXP7 276 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 DDX53Q86TM3 631 aaKnown RBP7.58□□□□□ -1.2
PKP4-217ENST00000628904 LINC00523Q86TU6 105 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 HPS6Q86YV9 775 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 CEP97Q8IW35 865 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 CLDN19Q8N6F1 224 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 ICA1LQ8NDH6 482 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 DENND1AQ8TEH3 1009 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 TRPC4APQ8TEL6 797 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 WDR60Q8WVS4 1066 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 TUBGCP3Q96CW5 907 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 PAWRQ96IZ0 340 aaKnown RBP7.58□□□□□ -1.2
PKP4-217ENST00000628904 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.58□□□□□ -1.24e-7■■□□□ 13.5
PKP4-217ENST00000628904 SLC24A3Q9HC58 644 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 TAS2R1Q9NYW7 299 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 CD274Q9NZQ7 290 aa7.58□□□□□ -1.2
PKP4-217ENST00000628904 KANSL3Q9P2N6 904 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms