RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PCDH8O95206 1070 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 WNT1P04628 370 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 TMEM253P0C7T8 217 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 HNRNPA2B1P22626 353 aaKnown RBP22.66■■□□□ 1.22
SF1-220ENST00000626028 MAT2AP31153 395 aaKnown RBP22.66■■□□□ 1.22
SF1-220ENST00000626028 SERPINB6P35237 376 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 NSUN2Q08J23 767 aaKnown RBP eCLIP22.66■■□□□ 1.22
SF1-220ENST00000626028 CYTH1Q15438 398 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 SMTNL2Q2TAL5 461 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 KCNT1Q5JUK3 1230 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 TMCO3Q6UWJ1 677 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 LEKR1Q6ZMV7 388 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 PARS2Q7L3T8 475 aaKnown RBP22.66■■□□□ 1.22
SF1-220ENST00000626028 LRRC49Q8IUZ0 686 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 TMEM145Q8NBT3 493 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 ASB12Q8WXK4 309 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 HSPH1Q92598 858 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 VOPP1Q96AW1 172 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 CELF6Q96J87 481 aaKnown RBP22.66■■□□□ 1.22
SF1-220ENST00000626028 ZNF641Q96N77 438 aaPredicted RBP22.66■■□□□ 1.22
SF1-220ENST00000626028 CSPG4P5Q96PW8 444 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 TUBGCP5Q96RT8 1024 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 ELF4Q99607 663 aaPredicted RBP22.66■■□□□ 1.22
SF1-220ENST00000626028 CDC6Q99741 560 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 TRIM5Q9C035 493 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 LHX3Q9UBR4 397 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 INTUQ9ULD6 942 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 PCDHB9Q9Y5E1 797 aa22.66■■□□□ 1.22
SF1-220ENST00000626028 TPRP12270 2363 aaKnown RBP22.65■■□□□ 1.22
SF1-220ENST00000626028 A0A1B0GTQ1 180 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 SH3BP5O60239 455 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 CBFA2T3O75081 653 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 PROSCO94903 275 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 TRIM16O95361 564 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 UGT2B4P06133 528 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 AKT2P31751 481 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 MAN1A1P33908 653 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 ARRB1P49407 418 aaPredicted RBP22.65■■□□□ 1.22
SF1-220ENST00000626028 NXPH1P58417 271 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 ATXN7L2Q5T6C5 722 aaPredicted RBP22.65■■□□□ 1.22
SF1-220ENST00000626028 LAYNQ6UX15 382 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 NPWQ8N729 165 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 OR6K2Q8NGY2 324 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 TSC1Q92574 1164 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 NHEJ1Q9H9Q4 299 aaPredicted RBP22.65■■□□□ 1.22
SF1-220ENST00000626028 SP110Q9HB58 689 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 ANGPTL2Q9UKU9 493 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 PCOLCE2Q9UKZ9 415 aa22.65■■□□□ 1.22
SF1-220ENST00000626028 TDRD6O60522 2096 aaKnown RBP22.65■■□□□ 1.22
SF1-220ENST00000626028 ARID1BQ8NFD5 2236 aaPredicted RBP22.64■■□□□ 1.21
SF1-220ENST00000626028 H0Y8X5 98 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 J3KR12 359 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 WNT9AO14904 365 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 PALMO75781 387 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 KRT7P08729 469 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 TCF4P15884 667 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 ARHGAP25P42331 645 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 GRK6P43250 576 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 RXRGP48443 463 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 ADKP55263 362 aaKnown RBP22.64■■□□□ 1.21
SF1-220ENST00000626028 SIM1P81133 766 aaPredicted RBP22.64■■□□□ 1.21
SF1-220ENST00000626028 TRIP6Q15654 476 aaKnown RBP22.64■■□□□ 1.21
SF1-220ENST00000626028 DCP2Q8IU60 420 aaKnown RBP22.64■■□□□ 1.21
SF1-220ENST00000626028 RHOT2Q8IXI1 618 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 BTBD6Q96KE9 485 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 KLHL32Q96NJ5 620 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 SLC17A9Q9BYT1 436 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 PCDH18Q9HCL0 1135 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 IPO11Q9UI26 975 aaKnown RBP22.64■■□□□ 1.21
SF1-220ENST00000626028 ZFR2Q9UPR6 939 aaKnown RBP22.64■■□□□ 1.21
SF1-220ENST00000626028 HS3ST3A1Q9Y663 406 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 ACACBO00763 2458 aa22.64■■□□□ 1.21
SF1-220ENST00000626028 AREL1O15033 823 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 MTA2O94776 668 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 HSPA9P38646 679 aaKnown RBP22.63■■□□□ 1.21
SF1-220ENST00000626028 RENBPP51606 427 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 PDK2Q15119 407 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 BRAT1Q6PJG6 821 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 MAP7D3Q8IWC1 876 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 BAHD1Q8TBE0 780 aaPredicted RBP22.63■■□□□ 1.21
SF1-220ENST00000626028 SETD7Q8WTS6 366 aaKnown RBP22.63■■□□□ 1.21
SF1-220ENST00000626028 KLHDC7BQ96G42 594 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 LENG8Q96PV6 779 aaPredicted RBP22.63■■□□□ 1.21
SF1-220ENST00000626028 PSKH2Q96QS6 385 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 CHP1Q99653 195 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 C1QTNF2Q9BXJ5 285 aa22.63■■□□□ 1.21
SF1-220ENST00000626028 TSPAN11A1L157 253 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 DFFAO00273 331 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 GKP32189 559 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 CDH6P55285 790 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 ELP6Q0PNE2 266 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 KRT81Q14533 505 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 TXNRD3NBQ6F5E7 133 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 TTC7BQ86TV6 843 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 DENND6BQ8NEG7 585 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 ANP32EQ9BTT0 268 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 PACSIN1Q9BY11 444 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 SEPT3Q9UH03 358 aa22.62■■□□□ 1.21
SF1-220ENST00000626028 NEMP1O14524 444 aa22.61■■□□□ 1.21
SF1-220ENST00000626028 SLC31A1O15431 190 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms