RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 PDGFRAP16234 1089 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 PTPN1P18031 435 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 UGT1A6P19224 532 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 UGT1A1P22309 533 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 UGT1A4P22310 534 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 UGT1A3P35503 534 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 UGT1A5P35504 534 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 HLCSP50747 726 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 SOX10P56693 466 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ATP6V0D1P61421 351 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 GUCA2AQ02747 115 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 PTPN11Q06124 597 aaPredicted RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 NFATC3Q12968 1075 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 BAATQ14032 418 aaPredicted RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 VGLL4Q14135 290 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 SQLEQ14534 574 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 CBX2Q14781 532 aaPredicted RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF846Q147U1 533 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 RAB39AQ14964 217 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 EMC2Q15006 297 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 OXA1LQ15070 435 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ATP6AP1Q15904 470 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 DPYSL2Q16555 572 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF699Q32M78 642 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 HSDL1Q3SXM5 330 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 PPM1JQ5JR12 505 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 AARS2Q5JTZ9 985 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 SAMD4BQ5PRF9 694 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 PPM1LQ5SGD2 360 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 HEATR6Q6AI08 1181 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 C16orf87Q6PH81 154 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 TTC33Q6PID6 262 aaPredicted RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ABRAXAS1Q6UWZ7 409 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 PRRT2Q7Z6L0 340 aaPredicted RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 CPXCR1Q8N123 301 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 FAM47BQ8NA70 645 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 URGCPQ8TCY9 931 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 NSUN6Q8TEA1 469 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 TANKQ92844 425 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 USP13Q92995 863 aaPredicted RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ACDQ96AP0 544 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ANKRD36BP1Q96IX9 119 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 FEM1CQ96JP0 617 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 SPATA13Q96N96 652 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF347Q96SE7 839 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 BCL7BQ9BQE9 202 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 TCHPQ9BT92 498 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 MCMBPQ9BTE3 642 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ADI1Q9BV57 179 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 TARS2Q9BW92 718 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 C1QTNF1Q9BXJ1 281 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 NIFKQ9BYG3 293 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 SNX25Q9H3E2 840 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 LRRC40Q9H9A6 602 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 GBA2Q9HCG7 927 aaPredicted RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF358Q9NW07 568 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 NCKIPSDQ9NZQ3 722 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 TXNDC16Q9P2K2 825 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 TJP2Q9UDY2 1190 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 FBXO40Q9UH90 709 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ZDHHC2Q9UIJ5 367 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 CPSF3Q9UKF6 684 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 CROTQ9UKG9 612 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 SCAF8Q9UPN6 1271 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 KCNH4Q9UQ05 1017 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ZFC3H1O60293 1989 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF638Q14966 1978 aaKnown RBP4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 PATJQ8NI35 1801 aa4.22□□□□□ -1.73
PTP4A1-205ENST00000626021 A0A096LPK6 155 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 IGKV6D-21A0A0A0MT36 114 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 TARM1B6A8C7 271 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 E7ENX8 843 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 H0YAE9 185 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 SDHDO14521 159 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 PFDN6O15212 129 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 DYNC1LI2O43237 492 aaPredicted RBP4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 AQP9O43315 295 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 SEC14L2O76054 403 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 DDHD2O94830 711 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 BCL10O95999 233 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 TNNC2P02585 160 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 NTRK1P04629 796 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 HOXC6P09630 235 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 SUPT20HL2P0C7V6 817 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 GSTT2P0CG29 244 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 GSTT2BP0CG30 244 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 UMPSP11172 480 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 CYP2C9P11712 490 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 FCGR1AP12314 374 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 CD19P15391 556 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 CCNA2P20248 432 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 IL10P22301 178 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 CYP2F1P24903 491 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 MPSTP25325 297 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 MGAT1P26572 445 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 ATICP31939 592 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 SCNN1AP37088 669 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 GRIA1P42261 906 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 PTPN9P43378 593 aa4.21□□□□□ -1.74
PTP4A1-205ENST00000626021 RXRGP48443 463 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms