RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CTSEP14091 401 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 GLB1P16278 677 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 L1CAMP32004 1257 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 YPEL5P62699 121 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 CUL4BQ13620 913 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 SEPT6Q14141 434 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 SLC39A14Q15043 492 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 MAP9Q49MG5 647 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 CERCAMQ5T4B2 595 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 ATP1A1-AS1Q5TC04 95 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 VPS36Q86VN1 386 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 HID1Q8IV36 788 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 CPT1CQ8TCG5 803 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 MBNL1Q9NR56 388 aaKnown RBP14.12□□□□□ -0.15
SNX1-214ENST00000625244 AKAP7Q9P0M2 348 aaPredicted RBP14.12□□□□□ -0.15
SNX1-214ENST00000625244 VPS51Q9UID3 782 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 ITM2BQ9Y287 266 aa14.12□□□□□ -0.15
SNX1-214ENST00000625244 MORC2Q9Y6X9 1032 aaPredicted RBP14.12□□□□□ -0.15
SNX1-214ENST00000625244 PVALEFA0A1B0GWK0 134 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 TTLL8A6PVC2 850 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 PDXKO00764 312 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 MAPK13O15264 365 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 ZNF821O75541 412 aaPredicted RBP14.11□□□□□ -0.15
SNX1-214ENST00000625244 VDRP11473 427 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 PNLIPP16233 465 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 ABL2P42684 1182 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 BLKP51451 505 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 PITX1P78337 314 aaPredicted RBP14.11□□□□□ -0.15
SNX1-214ENST00000625244 ALG11Q2TAA5 492 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 C22orf39Q6P5X5 142 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 LCLAT1Q6UWP7 414 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 LINGO4Q6UY18 593 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 ASB18Q6ZVZ8 466 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 RD3Q7Z3Z2 195 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 ZSCAN30Q86W11 494 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 GKN2Q86XP6 184 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 UNC5BQ8IZJ1 945 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 ATP6V0D2Q8N8Y2 350 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 IQUBQ8NA54 791 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 TFAP2BQ92481 460 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 FAM149B1Q96BN6 582 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 RPRD1AQ96P16 312 aaPredicted RBP14.11□□□□□ -0.15
SNX1-214ENST00000625244 USP28Q96RU2 1077 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 MUC3BQ9H195 1237 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 GPN2Q9H9Y4 310 aaPredicted RBP14.11□□□□□ -0.15
SNX1-214ENST00000625244 RAB20Q9NX57 234 aa14.11□□□□□ -0.15
SNX1-214ENST00000625244 LOC101059948A0A1B0GTJ6 334 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 B4GAT1O43505 415 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 TSPAN6O43657 245 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 FBXO21O94952 628 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 TRUB2O95900 331 aaKnown RBP14.1□□□□□ -0.15
SNX1-214ENST00000625244 IGLV3-25P01717 112 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 B4GALNT1Q00973 533 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 EIF4EBP2Q13542 120 aaPredicted RBP14.1□□□□□ -0.15
SNX1-214ENST00000625244 EIF2S3LQ2VIR3 472 aaKnown RBP14.1□□□□□ -0.15
SNX1-214ENST00000625244 KRT39Q6A163 491 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 TCTN3Q6NUS6 607 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 INTS8Q75QN2 995 aaKnown RBP14.1□□□□□ -0.15
SNX1-214ENST00000625244 ART4Q93070 314 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 ZSWIM1Q9BR11 485 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 LRIT1Q9P2V4 623 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 VANGL2Q9ULK5 521 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 TBC1D30Q9Y2I9 924 aa14.1□□□□□ -0.15
SNX1-214ENST00000625244 SHANK1Q9Y566 2161 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 NEMP1O14524 444 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 HGSO14964 777 aaPredicted RBP14.09□□□□□ -0.15
SNX1-214ENST00000625244 CPNE6O95741 557 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 GGCXP38435 758 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 CLCN6P51797 869 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 KRT83P78385 493 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 AUHQ13825 339 aaKnown RBP14.09□□□□□ -0.15
SNX1-214ENST00000625244 ARHGEF7Q14155 803 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 HLTFQ14527 1009 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNX1-214ENST00000625244 KRTAP21-3Q3LHN1 58 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 AMZ1Q400G9 498 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 KCTD16Q68DU8 428 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 OGFOD3Q6PK18 319 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 PIM3Q86V86 326 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 FBXL13Q8NEE6 735 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 HSFY1Q96LI6 401 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 NUDT22Q9BRQ3 303 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 DDA1Q9BW61 102 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNX1-214ENST00000625244 DONSONQ9NYP3 566 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 SLC12A6Q9UHW9 1150 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 PILRAQ9UKJ1 303 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 KCNMB2Q9Y691 235 aa14.09□□□□□ -0.15
SNX1-214ENST00000625244 IGHV5-10-1A0A0J9YXX1 117 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 MKRN2OSH3BPM6 223 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 M0QYV0 167 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 KLRC4O43908 158 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 RASGRP1O95267 797 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 PDGFAP04085 211 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 KRT13P13646 458 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 SYT1P21579 422 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 GTF2H1P32780 548 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 OR1D5P58170 312 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 CUL2Q13617 745 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 C16orf46Q6P387 395 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 ENPP7Q6UWV6 458 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms