RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ETS1P14921 441 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 NFKB1P19838 968 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 RPL22P35268 128 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 MAPK8P45983 427 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 RECQLP46063 649 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 CRY1Q16526 586 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 ATXN7L2Q5T6C5 722 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 C9orf64Q5T6V5 341 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 TMEM92Q6UXU6 159 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 DPY19L3Q6ZPD9 716 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 PRUNE1Q86TP1 453 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 JAMLQ86YT9 394 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 ARRDC2Q8TBH0 407 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 IMP4Q96G21 291 aaKnown RBP20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 HHIPQ96QV1 700 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 FCRL5Q96RD9 977 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 SEMA3CQ99985 751 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 MTG2Q9H4K7 406 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 RSPH14Q9UHP6 348 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 CKAP5Q14008 2032 aa20.09■□□□□ 0.81
PDLIM2-221ENST00000622702 FAM187AA6NFU0 413 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 TTI1O43156 1089 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 SIN3BO75182 1162 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 ZSCAN5DPP0CG00 497 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 PXNP49023 591 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 CCNHP51946 323 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 AP1S1P61966 158 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 ITKQ08881 620 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 DMWDQ09019 674 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 NIPAL4Q0D2K0 466 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 CAMK2GQ13555 558 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 PTK6Q13882 451 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 PPP1R7Q15435 360 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 PARP6Q2NL67 630 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 MYLK3Q32MK0 819 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 SRLQ86TD4 932 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 CAMKK1Q8N5S9 505 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 NOA1Q8NC60 698 aaKnown RBP20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 CCHCR1Q8TD31 782 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 FAM126AQ9BYI3 521 aaPredicted RBP20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 PRSS16Q9NQE7 514 aa20.08■□□□□ 0.81
PDLIM2-221ENST00000622702 ALOX15BO15296 676 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 INSIG1O15503 277 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 RAD51CO43502 376 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 POP4O95707 220 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 HOXB2P14652 356 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 SCNN1BP51168 640 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 DGKEP52429 567 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 DSC2Q02487 901 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 ELAVL3Q14576 367 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 STARD3Q14849 445 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 SLC14A2Q15849 920 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 NCEH1Q6PIU2 408 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 KLHDC8BQ8IXV7 354 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 TSTD1Q8NFU3 115 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 NELL1Q92832 810 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 VOPP1Q96AW1 172 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 TADA1Q96BN2 335 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 PPP1R2P1Q96PQ5 205 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 CPEB1Q9BZB8 566 aaKnown RBP20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 NOD2Q9HC29 1040 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 SCUBE2Q9NQ36 999 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 ZSCAN32Q9NX65 697 aa20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 EVLQ9UI08 416 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 FARP1Q9Y4F1 1045 aaPredicted RBP20.07■□□□□ 0.8
PDLIM2-221ENST00000622702 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 A0A1W2PQF6 199 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 BNIP3LO60238 219 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 SYNCRIPO60506 623 aaKnown RBP20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 METTL18O95568 372 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 APBB3O95704 486 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 MMP2P08253 660 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 PSMB4P28070 264 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 HOXA6P31267 233 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 FDFT1P37268 417 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 FNTBP49356 437 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 NHLH1Q02575 133 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 RAD51Q06609 339 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 TRIP13Q15645 432 aaPredicted RBP20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 PRPF39Q86UA1 669 aaKnown RBP20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 CHST14Q8NCH0 376 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 OR8D1Q8WZ84 308 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 LRIG1Q96JA1 1093 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 HEPHQ9BQS7 1158 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 FBRSQ9HAH7 460 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 CD248Q9HCU0 757 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 R4GN57 208 aa20.06■□□□□ 0.8
PDLIM2-221ENST00000622702 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 TTC24A2A3L6 582 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 GJB3O75712 270 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 SERPINF2P08697 491 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 SKOR1P84550 965 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 IHHQ14623 411 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 GRM3Q14832 879 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 C8orf74Q6P047 294 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 STK40Q8N2I9 435 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 RYBPQ8N488 228 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 ZBTB44Q8NCP5 570 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 LRRN4CLQ8ND94 238 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 OR6K2Q8NGY2 324 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms