RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 TMEM233B4DJY2 109 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 G3V2L1 256 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 SYN3O14994 580 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 INPPL1O15357 1258 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 RAMP2O60895 175 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 KRT34O76011 436 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 ANXA9O76027 345 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 SORBS2O94875 1100 aaKnown RBP13.22□□□□□ -0.29
AGAP3-226ENST00000622464 SLC35E2BP0CK96 405 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 NCF2P19878 526 aaPredicted RBP13.22□□□□□ -0.29
AGAP3-226ENST00000622464 ADRA1AP35348 466 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 TAS2R39P59534 338 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 THOC5Q13769 683 aaKnown RBP13.22□□□□□ -0.29
AGAP3-226ENST00000622464 SEPT8Q92599 483 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 FUBP3Q96I24 572 aaKnown RBP eCLIP13.22□□□□□ -0.291e-8■■■■■ 41
AGAP3-226ENST00000622464 NSL1Q96IY1 281 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 RNF208Q9H0X6 261 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 WDR55Q9H6Y2 383 aaPredicted RBP13.22□□□□□ -0.29
AGAP3-226ENST00000622464 MKS1Q9NXB0 559 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 TAS2R1Q9NYW7 299 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 CRYL1Q9Y2S2 319 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 SLC38A8A6NNN8 435 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 ERI2A8K979 691 aaKnown RBP13.22□□□□□ -0.29
AGAP3-226ENST00000622464 TMEM189-UBE2V1I3L0A0 370 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 KLF11O14901 512 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 HSPA4LO95757 839 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 MMP2P08253 660 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 TSPAN8P19075 237 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 MXRA7P84157 204 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 PLD1Q13393 1074 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 MRPL58Q14197 206 aaKnown RBP13.22□□□□□ -0.29
AGAP3-226ENST00000622464 KIAA1841Q6NSI8 718 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 CYS1Q717R9 158 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 NPAS4Q8IUM7 802 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 SCML4Q8N228 414 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 CCNYL1Q8N7R7 359 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 PIWIL2Q8TC59 973 aaKnown RBP13.22□□□□□ -0.29
AGAP3-226ENST00000622464 DTX3LQ8TDB6 740 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 DIS3LQ8TF46 1054 aaKnown RBP13.22□□□□□ -0.29
AGAP3-226ENST00000622464 EXT2Q93063 718 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 TRIM62Q9BVG3 475 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 MARCH4Q9P2E8 410 aaPredicted RBP13.22□□□□□ -0.29
AGAP3-226ENST00000622464 XPR1Q9UBH6 696 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 TLK1Q9UKI8 766 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 SH3BP1Q9Y3L3 701 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 ARL5AQ9Y689 179 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
AGAP3-226ENST00000622464 C2orf78A6NCI8 922 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 SERPINE1P05121 402 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 JUNP05412 331 aaKnown RBP13.21□□□□□ -0.29
AGAP3-226ENST00000622464 SBK3P0C264 359 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 PTPN4P29074 926 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 RGRP47804 291 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 ARCN1P48444 511 aaKnown RBP13.21□□□□□ -0.29
AGAP3-226ENST00000622464 GEMP55040 296 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 GPR17Q13304 367 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 KDELC1Q6UW63 502 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 LINGO4Q6UY18 593 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 RANBP10Q6VN20 620 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 PIM3Q86V86 326 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 CENPLQ8N0S6 344 aaPredicted RBP13.21□□□□□ -0.29
AGAP3-226ENST00000622464 PXYLP1Q8TE99 480 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 PPP4R1Q8TF05 950 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 WDR60Q8WVS4 1066 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 GATA5Q9BWX5 397 aaPredicted RBP13.21□□□□□ -0.29
AGAP3-226ENST00000622464 ACE2Q9BYF1 805 aaPredicted RBP13.21□□□□□ -0.29
AGAP3-226ENST00000622464 IRAK4Q9NWZ3 460 aa13.21□□□□□ -0.29
AGAP3-226ENST00000622464 ZFP37Q9Y6Q3 630 aaPredicted RBP13.21□□□□□ -0.29
AGAP3-226ENST00000622464 GOLGA8CPA6NN73 597 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 TGDSO95455 350 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 NAGLUP54802 743 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 ABCE1P61221 599 aaKnown RBP13.21□□□□□ -0.3
AGAP3-226ENST00000622464 CSHL1Q14406 222 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 SLC9B1Q4ZJI4 515 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 LINC00523Q86TU6 105 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 ATP6V0D2Q8N8Y2 350 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 HHIPL1Q96JK4 782 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 BTN2A3PQ96KV6 586 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 OLFM1Q99784 485 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 KCNK4Q9NYG8 393 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 DOCK4Q8N1I0 1966 aa13.21□□□□□ -0.3
AGAP3-226ENST00000622464 MIA3Q5JRA6 1907 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 RHOQP17081 205 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 TACR2P21452 398 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 CDK7P50613 346 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 TRIP4Q15650 581 aaPredicted RBP13.2□□□□□ -0.3
AGAP3-226ENST00000622464 TRIM60Q495X7 471 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 FBXO48Q5FWF7 155 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 SIRPB2Q5JXA9 342 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 AFMIDQ63HM1 303 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 PDPK2PQ6A1A2 396 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 TRIM42Q8IWZ5 723 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 PHTF2Q8N3S3 785 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 FSTL5Q8N475 847 aaPredicted RBP13.2□□□□□ -0.3
AGAP3-226ENST00000622464 RBM15BQ8NDT2 890 aaKnown RBP13.2□□□□□ -0.3
AGAP3-226ENST00000622464 ACMSDQ8TDX5 336 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 HDAC10Q969S8 669 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 MCUR1Q96AQ8 359 aa13.2□□□□□ -0.3
AGAP3-226ENST00000622464 ZNF570Q96NI8 536 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms