RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 ANKS6Q68DC2 871 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 MARK2Q7KZI7 788 aaKnown RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 HPS6Q86YV9 775 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 SNX31Q8N9S9 440 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 BHLHE22Q8NFJ8 381 aaPredicted RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 SLC9A7Q96T83 725 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 ECSITQ9BQ95 431 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 MRPL57Q9BQC6 102 aaKnown RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 C17orf80Q9BSJ5 609 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 GATA5Q9BWX5 397 aaPredicted RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 AGO3Q9H9G7 860 aaKnown RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 CROTQ9UKG9 612 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 HOXA2O43364 376 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 ITM2AO43736 263 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 ATXN8OSP0DMR3 200 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 VAV1P15498 845 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 PLD1Q13393 1074 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 PIWIL4Q7Z3Z4 852 aaKnown RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 CIR1Q86X95 450 aaPredicted RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 TRPC4APQ8TEL6 797 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 PPP2R3CQ969Q6 453 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 VPS50Q96JG6 964 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 PIDD1Q9HB75 910 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 VWA7Q9Y334 891 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 PSAT1Q9Y617 370 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 ABL2P42684 1182 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 GLUD2P49448 558 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 CCL23P55773 120 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 TMED1Q13445 227 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 DDX39BQ13838 428 aaKnown RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 AARS2Q5JTZ9 985 aaKnown RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 UGT3A1Q6NUS8 523 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 SCIMPQ6UWF3 145 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 CDHR3Q6ZTQ4 885 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 ACOX2Q99424 681 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 IGSF9Q9P2J2 1179 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 MOSPD1Q9UJG1 213 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 PIRO00625 290 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 PIK3R1P27986 724 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 SLC18A1P54219 525 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 IRF9Q00978 393 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 DSC2Q02487 901 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 KLF10Q13118 480 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 MRPS31Q92665 395 aaKnown RBP13.39□□□□□ -0.27
SIRPA-204ENST00000622179 TM6SF2Q9BZW4 377 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 GDAP2Q9NXN4 497 aa13.39□□□□□ -0.27
SIRPA-204ENST00000622179 hCG_2014768A0A024R1R8 64 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 FAM159BA6NKW6 160 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 TMEM114B3SHH9 223 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 PSMA4P25789 261 aaKnown RBP13.38□□□□□ -0.27
SIRPA-204ENST00000622179 ARHGDIAP52565 204 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 PHEXP78562 749 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 NR6A1Q15406 480 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 SZRD1Q7Z422 152 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 DDX53Q86TM3 631 aaKnown RBP13.38□□□□□ -0.27
SIRPA-204ENST00000622179 SMOQ99835 787 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 SLC39A8Q9C0K1 460 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 HMX1Q9NP08 348 aaPredicted RBP13.38□□□□□ -0.27
SIRPA-204ENST00000622179 MYO18AQ92614 2054 aaKnown RBP13.38□□□□□ -0.27
SIRPA-204ENST00000622179 DNAJC25-GNG10A0A024R161 153 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 C9IYK1 514 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 LRG1P02750 347 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 WEE1P30291 646 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 CLCN5P51795 746 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 GJA9P57773 515 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 CDK18Q07002 472 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 KRT72Q14CN4 511 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 RALGPS1Q5JS13 557 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 ZBTB49Q6ZSB9 765 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.38□□□□□ -0.27
SIRPA-204ENST00000622179 GANCQ8TET4 914 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 TMEM40Q8WWA1 233 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 NRBF2Q96F24 287 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 PGAP2Q9UHJ9 254 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 MCM8Q9UJA3 840 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 SAC3D1A6NKF1 404 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 ZBTB42B2RXF5 422 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 TBX18O95935 607 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 URODP06132 367 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 KCNE1P15382 129 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 IRGCQ6NXR0 463 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 EFL1Q7Z2Z2 1120 aaKnown RBP13.38□□□□□ -0.27
SIRPA-204ENST00000622179 SPDYE1Q8NFV5 336 aaPredicted RBP13.38□□□□□ -0.27
SIRPA-204ENST00000622179 CRTAC1Q9NQ79 661 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 PKD2L2Q9NZM6 624 aa13.38□□□□□ -0.27
SIRPA-204ENST00000622179 LAMB2P55268 1798 aa13.37□□□□□ -0.27
SIRPA-204ENST00000622179 FAM72CH0Y354 149 aa13.37□□□□□ -0.27
SIRPA-204ENST00000622179 PEX11AO75192 247 aa13.37□□□□□ -0.27
SIRPA-204ENST00000622179 HSPA1AP0DMV8 641 aaKnown RBP13.37□□□□□ -0.27
SIRPA-204ENST00000622179 HSPA1BP0DMV9 641 aaKnown RBP13.37□□□□□ -0.27
SIRPA-204ENST00000622179 ATP6V1C1P21283 382 aa13.37□□□□□ -0.27
SIRPA-204ENST00000622179 FGFR3P22607 806 aa13.37□□□□□ -0.27
SIRPA-204ENST00000622179 CCNCP24863 283 aa13.37□□□□□ -0.27
SIRPA-204ENST00000622179 MAP4P27816 1152 aaKnown RBP13.37□□□□□ -0.27
SIRPA-204ENST00000622179 PTPRNQ16849 979 aa13.37□□□□□ -0.27
SIRPA-204ENST00000622179 FBXO48Q5FWF7 155 aa13.37□□□□□ -0.27
SIRPA-204ENST00000622179 FAM72AQ5TYM5 149 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms